Gorai.002G124900 (Gossypium raimondii)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Gorai.002G124900 T024857_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.716 0.716
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G124900.1 BBR 1 336
Gorai.002G124900.2 BBR 1 336
Gorai.002G124900.3 BBR 1 326
Gorai.002G124900.4 BBR 1 326
Gorai.002G124900.5 BBR 1 326
Gorai.002G124900.6 BBR 1 336
Gorai.002G124900.7 BBR 1 336

Links

Other BBR family TFs
Other Gossypium raimondii TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AEPI002838 Anopheles epiroticus AEPI002838 N
PPAI001438 Phlebotomus papatasi PPAI001438 N
LLOJ005627 Lutzomyia longipalpis LLOJ005627 N
ASTEI10230 Anopheles stephensi ASTEI10230 N
AQUA001470 Anopheles quadriannulatus AQUA001470 N
AMIN002952 Anopheles minimus AMIN002952 N
AMAM015766 Anopheles maculatus AMAM015766 N
AFUN001511 Anopheles funestus AFUN001511 N
AFAF013002 Anopheles farauti AFAF013002 N
ADAC007774 Anopheles darlingi ADAC007774 N
ADIR002560 Anopheles dirus ADIR002560 N
ACUA000109 Anopheles culicifacies ACUA000109 N
ACOM034946 Anopheles coluzzii ACOM034946 N
ACHR002639 Anopheles christyi ACHR002639 N
AATE008289 Anopheles atroparvus AATE008289 N
AARA010055 Anopheles arabiensis AARA010055 N
AGAP003739 Anopheles gambiae AGAP003739 N