CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10042056.g
(
Linum usitatissimum
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Lus10042056.g
T024871_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10042056
BBR
1
294
MDDGEQHQNGRCKDYYKAAHNPWNITPQHQSKEQQPNALVMNKKILSILAERDAAIQERNIALAERKEALVARDEAILQREQALAERDIALRERDKAFAAMQYRESSMNYSAKRIPHPVYRSLNDSEVTNMDALPITTIPAGKPPKRSKKANKSPRKGNNKSVGEDLNRVVVRVTEGRKFKTEWDTLDVGLNLISYDEATMPAPVCSCTGTAHQCYKWGNGGWQSSCCTTTMSCHPLPQLPNKRHARVGGRKMSGSVFTKLLSRLAGEGHDLAVPIDLKDYWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Linum usitatissimum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_200704.1
Arabidopsis lyrata
scaffold_200704.1
I
0.745
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
Lus10018060.g
Linum usitatissimum
Lus10018060.g
N
0.909