CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.5751
(
Phytophthora lateralis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
fgenesh_scip_prom.28083.5751
T026496_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.5751
BED ZF
165
227
EEWEHFTRLQNEGYIGKSNFFYAVCKYCQHAFDEAAEDQKALLVPEKMVGRREKMRKHLSLCP
fgenesh_scip_prom.28083.5751
BED ZF
293
353
DEWHYFTRLERKKDSAYYYARCNFCQQAFEAAPESMKATMEPAIVMGRKSNMQTHLAKCPH
Links
Other
BED ZF
family TFs
Other
Phytophthora lateralis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pag1_scaffold_353-fgenesh-gene-0.8
Pythium aphanidermatum
maker-pag1_scaffold_353-fgenesh-gene-0.8
N
0.786
maker-pve_contig_515-snap-gene-0.12
Pythium vexans
maker-pve_contig_515-snap-gene-0.12
N
0.867
Phyra85255
Phytophthora ramorum
Phyra85255
N
1.000
PYU1_G006326
Pythium ultimum
PYU1_G006326
N
0.759