CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI04G21350
(
Oryza meridionalis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OMERI04G21350
T027104_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI04G21350.1
BED ZF
1811
1862
SKAWGHFDITEEENGKPLKARCIHCHTVVKCTSDKGTSVLHNHLKSDSCKKK
Links
Other
BED ZF
family TFs
Other
Oryza meridionalis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005538
Oryza indica
BGIOSGA005538
N
LPERR02G27810
Leersia perrieri
LPERR02G27810
N
OBART06G06930
Oryza barthii
OBART06G06930
N
OGLUM02G34390
Oryza glumaepatula
OGLUM02G34390
N
OMERI02G32310
Oryza meridionalis
OMERI02G32310
N
ONIVA02G33680
Oryza nivara
ONIVA02G33680
N
OPUNC02G31340
Oryza punctata
OPUNC02G31340
N
ORGLA02G0293600
Oryza glaberrima
ORGLA02G0293600
N
ORGLA11G0178000
Oryza glaberrima
ORGLA11G0178000
N
ORGLA11G0181000
Oryza glaberrima
ORGLA11G0181000
N
ORUFI02G35460
Oryza rufipogon
ORUFI02G35460
N
OS02G0768700
Oryza sativa
OS02G0768700
N