CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA08G04740
(
Oryza nivara
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
ONIVA08G04740
T027113_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA08G04740.1
BED ZF
253
303
SKVWDEYKPIYVNGVVQSAECRYCHILMSCKGSDGHSNGTSHLWRHQKICR
ONIVA08G04740.1
BED ZF
352
396
SKVWEEFMPVYVEGRIQGAECLHCHKRLSADKGRSHLNRHTQTCP
ONIVA08G04740.2
BED ZF
253
303
SKVWDEYKPIYVNGVVQSAECRYCHILMSCKGSDGHSNGTSHLWRHQKICR
ONIVA08G04740.2
BED ZF
339
383
SKVWEEFMPVYVEGRIQGAECLHCHKRLSADKGRSHLNRHTQTCP
Links
Other
BED ZF
family TFs
Other
Oryza nivara
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_01100
Verticillium albo atrum
VDBG_01100
N
NechaG33630
Fusarium solani
NechaG33630
N
VDAG_00710
Verticillium dahliae
VDAG_00710
N
VDBG_01100
Verticillium alfalfae
VDBG_01100
N
e_gw1.18.1441.1
Nectria haematococca
e_gw1.18.1441.1
N