CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0019s02060
(
Populus trichocarpa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
POPTR_0019s02060
T027395_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0019s02060.1
BED ZF
6
49
DPFWKEVEDMNDGSMKCKFCGHLFANGTSISRIKWHLSGERGHG
Links
Other
BED ZF
family TFs
Other
Populus trichocarpa
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR04G13880
Leersia perrieri
LPERR04G13880
N
0.000
OBART04G17300
Oryza barthii
OBART04G17300
N
0.000
OLONG_009316
Oryza longistaminata
OLONG_009316
N
0.000
ONIVA04G15600
Oryza nivara
ONIVA04G15600
N
0.000
ORGLA04G0144200
Oryza glaberrima
ORGLA04G0144200
N
0.000
ORUFI04G18730
Oryza rufipogon
ORUFI04G18730
N
0.000