Cagra.0690s0016 (Capsella grandiflora)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Cagra.0690s0016 T028205_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0690s0016.1.p BED ZF 48 79
Cagra.0690s0016.1.p BED ZF 111 143

Links

Other BED ZF family TFs
Other Capsella grandiflora TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G26940 Arabidopsis thaliana AT2G26940 N 0.818
fgenesh2_kg.4__629__AT2G26940.1 Arabidopsis lyrata fgenesh2_kg.4__629__AT2G26940.1 N 0.855
Bostr.3640s0138 Boechera stricta Bostr.3640s0138 N 0.825
Carubv10015344m.g Capsella rubella Carubv10015344m.g N 0.964
Thhalv10002171m.g Eutrema salsugineum Thhalv10002171m.g N 0.729