CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene26434-v1.0-hybrid
(
Fragaria vesca
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
gene26434-v1.0-hybrid
T028310_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna26434.1-v1.0-hybrid
BED ZF
232
287
SEVWDHFVKLKNPDGTKVAKPRAKCKYCPQTYACDPKTNGTTSMRTHMLYQCKKCP
Links
Other
BED ZF
family TFs
Other
Fragaria vesca
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOM042347
Anopheles coluzzii
ACOM042347
N
PPAI001013
Phlebotomus papatasi
PPAI001013
N
MDOA007188
Musca domestica
MDOA007188
N
ASTEI05558
Anopheles stephensi
ASTEI05558
N
ASIS008690
Anopheles sinensis
ASIS008690
N
AMIN003349
Anopheles minimus
AMIN003349
N
AMEM011276
Anopheles merus
AMEM011276
N
AMAM021937
Anopheles maculatus
AMAM021937
N
AFUN001693
Anopheles funestus
AFUN001693
N
AFAF000552
Anopheles farauti
AFAF000552
N
AEPI009840
Anopheles epiroticus
AEPI009840
N
ADIR002423
Anopheles dirus
ADIR002423
N
ACUA010867
Anopheles culicifacies
ACUA010867
N
CpipJ_CPIJ006335
Culex pipiens
CpipJ_CPIJ006335
N
AATE015739
Anopheles atroparvus
AATE015739
N
AARA006903
Anopheles arabiensis
AARA006903
N
AALB008095
Anopheles albimanus
AALB008095
N
Cflo_01889--XP_001120905.1_APIME
Camponotus floridanus
Cflo_01889--XP_001120905.1_APIME
N
LotgiG100548
Lottia gigantea
LotgiG100548
N
L798_07377
Zootermopsis nevadensis
L798_07377
N
HelroG128063
Helobdella robusta
HelroG128063
N
GD20794
Drosophila simulans
FBgn0192257
N
DAPPUDRAFT_42666
Daphnia pulex
DAPPUDRAFT_42666
N
CPIJ006335
Culex quinquefasciatus
CPIJ006335
N
CapteG108462
Capitella teleta
CapteG108462
N