CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene32271-v1.0-hybrid
(
Fragaria vesca
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
gene32271-v1.0-hybrid
T028321_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna32271.1-v1.0-hybrid
BED ZF
95
138
DACWEHCVLVDATKQKVRCNYCQREFSGGVYRMKFHLAQIKNKD
Links
Other
BED ZF
family TFs
Other
Fragaria vesca
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP20580
Atta cephalotes
ACEP20580
N
DAPPUDRAFT_290568
Daphnia pulex
DAPPUDRAFT_290568
N
L798_02531
Zootermopsis nevadensis
L798_02531
N
NV12187
Nasonia vitripennis
NV12187
N
PHUM125090
Pediculus humanus
PHUM125090
N
RPRC009375
Rhodnius prolixus
RPRC009375
N
SINV18003
Solenopsis invicta
SINV18003
N
YQE_07461
Dendroctonus ponderosae
YQE_07461
N
Cflo_02189--XP_001120862.1_APIME
Camponotus floridanus
Cflo_02189--XP_001120862.1_APIME
N
Hsal_05246--XP_001120862.1_APIME
Harpegnathos saltator
Hsal_05246--XP_001120862.1_APIME
N
CLEC007987
Cimex lectularius
CLEC007987
N