Pavir.Ea02685 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Ea02685 T028462_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea02685.1.p BED ZF 2 37

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF398 Homo sapiens ENSG00000197024 D
ZNF398 Oryctolagus cuniculus ENSOCUG00000008416 I
Myotis_brandtii_ZNF398_10025637 Myotis brandtii Myotis_brandtii_ZNF398_10025637 I
ENSP00000338984 Macaca fascicularis ENSP00000338984 I
ENSTSYG00000002784 Tarsius syrichta ENSTSYG00000002784 I
ENSSTOG00000013384 Ictidomys tridecemlineatus ENSSTOG00000013384 I
Zfp398 Rattus norvegicus ENSRNOG00000006703 I
ZNF398 Pteropus vampyrus ENSPVAG00000010865 I
ZNF398 Pan troglodytes ENSPTRG00000023917 I
ENSPPYG00000018150 Pongo abelii ENSPPYG00000018150 I
ENSPANG00000015944 Papio anubis ENSPANG00000015944 I
ZNF398 Ochotona princeps ENSOPRG00000010531 I
ZNF398 Otolemur garnettii ENSOGAG00000016740 I
ZNF398 Bos taurus ENSBTAG00000020445 I
ENSNLEG00000003700 Nomascus leucogenys ENSNLEG00000003700 I
Zfp398 Mus musculus ENSMUSG00000062519 I
ENSMPUG00000006622 Mustela putorius furo ENSMPUG00000006622 I
ZNF398 Myotis lucifugus ENSMLUG00000007451 I
ENSMICG00000016618 Microcebus murinus ENSMICG00000016618 I
ZNF398 Gorilla gorilla ENSGGOG00000005812 I
ZNF398 Dasypus novemcinctus ENSDNOG00000038814 I
ENSCSAG00000007015 Chlorocebus sabaeus ENSCSAG00000007015 I
ZNF398 Choloepus hoffmanni ENSCHOG00000007407 I
ZNF398 Canis familiaris ENSCAFG00000004429 I