Pavir.Gb00931 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Gb00931 T028504_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb00931.1.p BED ZF 141 193

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PVAR5_7542 Byssochlamys spectabilis PVAR5_7542 N
LEMA_P041600.1 Leptosphaeria maculans LEMA_P041600.1 N
MBM_09326 Marssonina brunnea MBM_09326 N
PAAG_04485 Paracoccidioides sp lutzii PAAG_04485 N
PABG_04273 Paracoccidioides brasiliensis PABG_04273 N
PEX1_014400 Penicillium expansum PEX1_014400 N
PGUG_02706 Meyerozyma guilliermondii PGUG_02706 N
PICST_41012 Scheffersomyces stipitis PICST_41012 N
PV04_04655 Capronia semiimmersa PV04_04655 N
PV07_09333 Cladophialophora immunda PV07_09333 N
PV10_05333 Exophiala mesophila PV10_05333 N
PV10_08376 Exophiala mesophila PV10_08376 N
HPODL_01861 Ogataea parapolymorpha HPODL_01861 N
SBOR_5447 Sclerotinia borealis SBOR_5447 N
SNOG_07829 Phaeosphaeria nodorum SNOG_07829 N
SS1G_03399 Sclerotinia sclerotiorum SS1G_03399 N
TSTA_047980 Talaromyces stipitatus TSTA_047980 N
UCRNP2_7879 Neofusicoccum parvum UCRNP2_7879 N
YALI0_D02475g Yarrowia lipolytica YALI0_D02475g N
e_gwh1.2.1.208.1 Pichia stipitis e_gwh1.2.1.208.1 N
estExt_fgenesh1_pg.C_20155 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20155 N
AB09962.1 Alternaria brassicicola AB09962.1 N
fgenesh1_pg.00855_#_193 Aspergillus carbonarius fgenesh1_pg.00855_#_193 N
PMAA_093380 Penicillium marneffei PMAA_093380 N
CANTEDRAFT_119040 Candida tenuis CANTEDRAFT_119040 N
CPAG_04574 Candida parapsilosis CPAG_04574 N
PGUG_02706 Candida guilliermondii PGUG_02706 N
SNOG_07829 Stagonospora nodorum SNOG_07829 N
A1O7_04609 Cladophialophora yegresii A1O7_04609 N
Bcin08g02020 Botrytis cinerea Bcin08g02020 N
BDDG_05933 Blastomyces dermatitidis BDDG_05933 N
ACLA_097570 Aspergillus clavatus CADACLAG00009030 N
CADAFLAG00008856 Aspergillus flavus CADAFLAG00008856 N
AFUA_6G02850 Aspergillus fumigatus CADAFUAG00000590 N
ATEG_07165 Aspergillus terreus CADATEAG00000447 N
NFIA_049190 Neosartorya fischeri CADNFIAG00004306 N
CIMG_10021 Coccidioides immitis CIMG_10021 N
COCC4DRAFT_184261 Bipolaris maydis COCC4DRAFT_184261 N
COCCADRAFT_81861 Bipolaris zeicola COCCADRAFT_81861 N
COCMIDRAFT_107681 Bipolaris oryzae COCMIDRAFT_107681 N
COCSADRAFT_105381 Bipolaris sorokiniana COCSADRAFT_105381 N
COCVIDRAFT_91698 Bipolaris victoriae COCVIDRAFT_91698 N
CORT_0A12580 Candida orthopsilosis CORT_0A12580 N
CPC735_011720 Coccidioides posadasii CPC735_011720 N
EPUS_05553 Endocarpon pusillum EPUS_05553 N
EURHEDRAFT_451951 Aspergillus ruber EURHEDRAFT_451951 N
HCBG_02929 Histoplasma capsulatum HCBG_02929 N