Pavir.J00513 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J00513 T028530_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J00513.1.p BED ZF 27 73

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IKZF4 Otolemur garnettii ENSOGAG00000034375 I
IKZF4 Loxodonta africana ENSLAFG00000026742 I
ENSMGAG00000010066 Meleagris gallopavo ENSMGAG00000010066 I
IKZF4 Myotis lucifugus ENSMLUG00000026014 I
IKZF4 Macaca mulatta ENSMMUG00000007523 I
ENSMPUG00000000964 Mustela putorius furo ENSMPUG00000000964 I
Ikzf4 Mus musculus ENSMUSG00000002578 I
ENSNLEG00000017564 Nomascus leucogenys ENSNLEG00000017564 I
ENSOARG00000010565 Ovis aries ENSOARG00000010565 I
IKZF4 Oryctolagus cuniculus ENSOCUG00000012558 I
IKZF4 Microcebus murinus ENSMICG00000011029 I
Aan_R005612 Calypte anna Aan_R005612 I
IKZF4 Ochotona princeps ENSOPRG00000007904 I
IKZF4 Procavia capensis ENSPCAG00000010641 I
ENSPPYG00000004641 Pongo abelii ENSPPYG00000004641 I
ENSSTOG00000010547 Ictidomys tridecemlineatus ENSSTOG00000010547 I
IKZF4 Pan troglodytes ENSPTRG00000005074 I
IKZF4 Pteropus vampyrus ENSPVAG00000007558 I
Ikzf4 Rattus norvegicus ENSRNOG00000005535 I
ENSP00000262032 Macaca fascicularis ENSP00000262032 I
ENSAMEG00000003228 Ailuropoda melanoleuca ENSAMEG00000003228 I
IKZF4 Bos taurus ENSBTAG00000012636 I
IKZF4 Canis familiaris ENSCAFG00000030801 I
IKZF4 Callithrix jacchus ENSCJAG00000006230 I
IKZF4 Cavia porcellus ENSCPOG00000009964 I
ENSCSAG00000005270 Chlorocebus sabaeus ENSCSAG00000005270 I
IKZF4 Dasypus novemcinctus ENSDNOG00000037824 I
Ikzf4 Dipodomys ordii ENSDORG00000015397 I
IKZF4 Equus caballus ENSECAG00000024175 I
IKZF4 Erinaceus europaeus ENSEEUG00000006871 I
IKZF4 Felis catus ENSFCAG00000029852 I
IKZF4 Homo sapiens ENSG00000123411 I
Myotis_brandtii_IKZF4_10009162 Myotis brandtii Myotis_brandtii_IKZF4_10009162 I
IKZF4 Gorilla gorilla ENSGGOG00000011558 I
ENSP00000262032-D1 Bos grunniens ENSP00000262032-D1 I
Pvit_00621 Pogona vitticeps Pvit_00621 N
Alligator_sinensis_CCG000741.1 Alligator sinensis Alligator_sinensis_CCG000741.1 N
ikzf4 Xenopus tropicalis XB-GENE-1219102 N
ENSXMAG00000011156 Xiphophorus maculatus ENSXMAG00000011156 N
IKZF4 Takifugu rubripes ENSTRUG00000012076 N
Cmyd_10003867 Chelonia mydas Cmyd_10003867 N
si:dkey-166n8.9 Takifugu rubripes ENSTRUG00000011798 N
IKZF4 Tetraodon nigroviridis ENSTNIG00000014592 N
Ogr17485 Ophisaurus gracilis Ogr17485 N
ikzf4.S Xenopus laevis XB-GENE-1219106 N
ENSSHAG00000007337 Sarcophilus harrisii ENSSHAG00000007337 N
ENSPSIG00000003074 Pelodiscus sinensis ENSPSIG00000003074 N
ENSPFOG00000023810 Poecilia formosa ENSPFOG00000023810 N
ENSPFOG00000001552 Poecilia formosa ENSPFOG00000001552 N
si:dkey-166n8.9 Oryzias latipes ENSORLG00000007632 N
IKZF4 Oryzias latipes ENSORLG00000001555 N
ENSONIG00000019065 Oreochromis niloticus ENSONIG00000019065 N
ENSONIG00000012141 Oreochromis niloticus ENSONIG00000012141 N
IKZF4 Monodelphis domestica ENSMODG00000001780 N
ENSGMOG00000007568 Gadus morhua ENSGMOG00000007568 N
ENSGMOG00000004722 Gadus morhua ENSGMOG00000004722 N
si:dkey-166n8.9 Gasterosteus aculeatus ENSGACG00000009112 N
IKZF4 Gasterosteus aculeatus ENSGACG00000000739 N
IKZF4 Echinops telfairi ENSETEG00000018642 N
IKZF4 Danio rerio ENSDARG00000037068 N
ENSAMXG00000012992 Astyanax mexicanus ENSAMXG00000012992 N