Pavir.J07427 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J07427 T028546_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J07427.1.p BED ZF 27 73

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sohlh2 Mus musculus ENSMUSG00000027794 D
Sohlh2 Rattus norvegicus ENSRNOG00000038091 D
SOHLH2 Homo sapiens ENSG00000120669 D
ENSOCUG00000017853 Oryctolagus cuniculus ENSOCUG00000017853 I
ENSNLEG00000001499 Nomascus leucogenys ENSNLEG00000001499 I
ENSOGAG00000001168 Otolemur garnettii ENSOGAG00000001168 I
ENSOPRG00000004777 Ochotona princeps ENSOPRG00000004777 I
ENSPPYG00000005276 Pongo abelii ENSPPYG00000005276 I
ENSPTRG00000005779 Pan troglodytes ENSPTRG00000005779 I
ENSPVAG00000000423 Pteropus vampyrus ENSPVAG00000000423 I
ENSSARG00000003728 Sorex araneus ENSSARG00000003728 I
ENSSHAG00000013234 Sarcophilus harrisii ENSSHAG00000013234 I
ENSSSCG00000026164 Sus scrofa ENSSSCG00000026164 I
ENSSTOG00000012257 Ictidomys tridecemlineatus ENSSTOG00000012257 I
ENSTBEG00000014863 Tupaia belangeri ENSTBEG00000014863 I
ENSTSYG00000004449 Tarsius syrichta ENSTSYG00000004449 I
ENSTTRG00000010489 Tursiops truncatus ENSTTRG00000010489 I
ENSMMUP00000001562 Macaca fascicularis ENSMMUP00000001562 I
ENSP00000393788-D1 Bos grunniens ENSP00000393788-D1 I
CCDC169-SOHLH2 Homo sapiens ENSG00000250709 I
ENSBTAG00000018955 Bos taurus ENSBTAG00000018955 I
ENSCAFG00000006206 Canis familiaris ENSCAFG00000006206 I
ENSCJAG00000018188 Callithrix jacchus ENSCJAG00000018188 I
ENSCPOG00000012403 Cavia porcellus ENSCPOG00000012403 I
ENSCSAG00000017881 Chlorocebus sabaeus ENSCSAG00000017881 I
ENSDNOG00000017970 Dasypus novemcinctus ENSDNOG00000017970 I
ENSECAG00000000201 Equus caballus ENSECAG00000000201 I
ENSFCAG00000004161 Felis catus ENSFCAG00000004161 I
ENSOARG00000010479 Ovis aries ENSOARG00000010479 I
ENSGGOG00000002130 Gorilla gorilla ENSGGOG00000002130 I
ENSMEUG00000002333 Macropus eugenii ENSMEUG00000002333 I
ENSMICG00000002484 Microcebus murinus ENSMICG00000002484 I
ENSMMUG00000001172 Macaca mulatta ENSMMUG00000001172 I
ENSMODG00000009965 Monodelphis domestica ENSMODG00000009965 I
ENSMPUG00000001856 Mustela putorius furo ENSMPUG00000001856 I
ENSAMEG00000004619 Ailuropoda melanoleuca ENSAMEG00000004619 I