CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CM0466.180.nc
(
Lotus japonicus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
CM0466.180.nc
T028893_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CM0466.180.nc
BED ZF
78
126
SSIWEHFTELSKDEVSDPTASCNYCGKRYLCDSKTHGTTNLWTHLKTCP
Links
Other
BED ZF
family TFs
Other
Lotus japonicus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_08959
Verticillium albo atrum
VDBG_08959
N
CFIO01_07116
Colletotrichum fioriniae
CFIO01_07116
N
CGGC5_7921
Colletotrichum gloeosporioides
CGGC5_7921
N
Cob_06920
Colletotrichum orbiculare
Cob_06920
N
CSUB01_09168
Colletotrichum sublineola
CSUB01_09168
N
GLRG_08237
Colletotrichum graminicola
GLRG_08237
N
VDAG_02411
Verticillium dahliae
VDAG_02411
N
VDAG_10210
Verticillium dahliae
VDAG_10210
N
VDBG_08959
Verticillium alfalfae
VDBG_08959
N