nAv.1.0.1.g00358 (Acanthocheilonema viteae)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 nAv.1.0.1.g00358 T029522_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nAv.1.0.1.t00358-RA BED ZF 43 86

Links

Other BED ZF family TFs
Other Acanthocheilonema viteae TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pir_contig_962-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_962-fgenesh-gene-0.0 N
estExt_fgenesh1_kg.C_00378 Phytophthora capsici estExt_fgenesh1_kg.C_00378 N
snap-piw_contig_1471-abinit-gene-0.10 Pythium iwayamai snap-piw_contig_1471-abinit-gene-0.10 N
PYU1_G005004 Pythium ultimum PYU1_G005004 N
PYU1_G004965 Pythium ultimum PYU1_G004965 N
PITG_05742 Phytophthora infestans PITG_05742 N
PITG_05734 Phytophthora infestans PITG_05734 N
Physo132525 Phytophthora sojae Physo132525 N
Phyra75938 Phytophthora ramorum Phyra75938 N
Phyra75932 Phytophthora ramorum Phyra75932 N
maker-pve_contig_244-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_244-fgenesh-gene-0.3 N
maker-piw_contig_1009-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1009-fgenesh-gene-0.1 N
F443_00235 Phytophthora parasitica F443_00235 N
maker-pir_contig_677-snap-gene-0.4 Pythium irregulare maker-pir_contig_677-snap-gene-0.4 N
maker-par_contig_498-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_498-fgenesh-gene-0.0 N
maker-pag1_scaffold_241-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_241-snap-gene-0.8 N
HpaG800557 Hyaloperonospora arabidopsidis HpaG800557 N
HpaG800546 Hyaloperonospora arabidopsidis HpaG800546 N
fgenesh_scip_prom.46568.2994 Phytophthora kernoviae fgenesh_scip_prom.46568.2994 N
fgenesh_scip_prom.46568.2990 Phytophthora kernoviae fgenesh_scip_prom.46568.2990 N
fgenesh_scip_prom.28083.8513 Phytophthora lateralis fgenesh_scip_prom.28083.8513 N
fgenesh_scip_prom.28083.7634 Phytophthora lateralis fgenesh_scip_prom.28083.7634 N
F443_02170 Phytophthora parasitica F443_02170 N