CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_10254
(
Coccidioides immitis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
CIMG_10254
T029874_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01298
M01112_2.00
Aspergillus nidulans
BCACGTGAYN
NRTCACGTGV
PBM
Lambert et al.(2019)
pEX0385
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_10254T0
bHLH
303
410
RRASHNLVERRRRDNINERIQDLSHLVPQHRLEDEKIRKQLLNNSSLAGSVGTPGLNSTNAATSLLAGGCGRRATSGNITMGLPIEEKEKGPNKGDILNGAVGWTRDL
Links
Other
bHLH
family TFs
Other
Coccidioides immitis
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
grhl2a
Gasterosteus aculeatus
ENSGACG00000003655
I
0.000
ENSLOCG00000009655
Lepisosteus oculatus
ENSLOCG00000009655
I
0.000
grhl2a
Tetraodon nigroviridis
ENSTNIG00000013309
I
0.000
ENSONIG00000006874
Oreochromis niloticus
ENSONIG00000006874
N
0.000
grhl2a
Oryzias latipes
ENSORLG00000002613
N
0.000
ENSPFOG00000010589
Poecilia formosa
ENSPFOG00000010589
N
0.000
grhl2a
Takifugu rubripes
ENSTRUG00000011936
N
0.000