CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CpipJ_CPIJ016930
(
Culex pipiens
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
CpipJ_CPIJ016930
T029941_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Msc
M01730_2.00
Mus musculus
NVCRKMYGBN
NVCRKMYGBN
PBM
Weirauch et al.(2014)
pTH5112
0.849
0.788
Tcf21
M01746_2.00
Mus musculus
RMCAKMTGK
MCAKMTGKY
PBM
Weirauch et al.(2014)
pTH5087
0.849
0.788
MSC
M02801_2.00
Homo sapiens
AACAGCTGTT
AACAGCTGTT
SELEX
Jolma et al.(2013)
MSC_1
0.849
0.788
Tcf21
M02819_2.00
Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB
SELEX
Jolma et al.(2013)
Tcf21_1
0.849
0.788
MSC
M04183_2.00
Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1
0.849
0.788
MSC
M04184_2.00
Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2
0.849
0.788
MSC
M04187_2.00
Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1
0.849
0.788
MSC
M04188_2.00
Homo sapiens
BRMCATATGKYN
NRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2
0.849
0.788
TCF21
M04092_2.00
Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1
0.849
0.788
TCF21
M04093_2.00
Homo sapiens
NRCCATATGKYV
BRMCATATGGYN
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2
0.849
0.788
MSC
M04185_2.00
Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1
0.849
0.788
MSC
M04186_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2
0.849
0.788
MSC
M04189_2.00
Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1
0.849
0.788
MSC
M04190_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2
0.849
0.788
TCF21
M04094_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1
0.849
0.788
TCF21
M04095_2.00
Homo sapiens
BACCATATGKYV
BRMCATATGGTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2
0.849
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ016930-RA
bHLH
35
87
QRNAANARERARMRVLSKAFFNLKRNIPWVPADTKLSKLDTLRLAKNYISYLA
Links
Other
bHLH
family TFs
Other
Culex pipiens
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSTOG00000012003
Ictidomys tridecemlineatus
ENSSTOG00000012003
N
ZBTB46
Oryctolagus cuniculus
ENSOCUG00000026351
N
ZBTB46
Otolemur garnettii
ENSOGAG00000000852
N
ENSONIG00000017400
Oreochromis niloticus
ENSONIG00000017400
N
zbtb46
Oryzias latipes
ENSORLG00000009686
N
ENSPANG00000026190
Papio anubis
ENSPANG00000026190
N
ENSPFOG00000005845
Poecilia formosa
ENSPFOG00000005845
N
ENSPSIG00000015887
Pelodiscus sinensis
ENSPSIG00000015887
N
ZBTB46
Pan troglodytes
ENSPTRG00000013754
N
Zbtb46
Rattus norvegicus
ENSRNOG00000014592
N
ENSSHAG00000017616
Sarcophilus harrisii
ENSSHAG00000017616
N
ZBTB46
Ornithorhynchus anatinus
ENSOANG00000004930
N
ENSTGUG00000007131
Taeniopygia guttata
ENSTGUG00000007131
N
ENSTNIG00000017877
Tetraodon nigroviridis
ENSTNIG00000017877
N
zbtb46
Takifugu rubripes
ENSTRUG00000004720
N
Afo_R011602
Aptenodytes forsteri
Afo_R011602
N
ENSP00000303102-D1
Bos grunniens
ENSP00000303102-D1
N
Myotis_brandtii_Zbtb46_10023447
Myotis brandtii
Myotis_brandtii_Zbtb46_10023447
N
Ogr02171
Ophisaurus gracilis
Ogr02171
N
zbtb46
Xenopus tropicalis
XB-GENE-5847062
N
zbtb46.S
Xenopus laevis
XB-GENE-5847067
N
XP_002944155
Xenopus tropicalis
XP_002944155
N
ZBTB46
Gorilla gorilla
ENSGGOG00000004815
N
ENSAMXG00000017494
Astyanax mexicanus
ENSAMXG00000017494
N
ENSAPLG00000014808
Anas platyrhynchos
ENSAPLG00000014808
N
ZBTB46
Bos taurus
ENSBTAG00000016667
N
ZBTB46
Callithrix jacchus
ENSCJAG00000010439
N
ZBTB46
Cavia porcellus
ENSCPOG00000002803
N
ENSCSAG00000016647
Chlorocebus sabaeus
ENSCSAG00000016647
N
zbtb46
Danio rerio
ENSDARG00000078191
N
ENSFALG00000005952
Ficedula albicollis
ENSFALG00000005952
N
ZBTB46
Homo sapiens
ENSG00000130584
N
ZBTB46
Gallus gallus
ENSGALG00000006062
N
ZBTB46
Anolis carolinensis
ENSACAG00000003631
N
ENSLACG00000003648
Latimeria chalumnae
ENSLACG00000003648
N
ZBTB46
Loxodonta africana
ENSLAFG00000012490
N
ENSLOCG00000005130
Lepisosteus oculatus
ENSLOCG00000005130
N
ENSMEUG00000015248
Macropus eugenii
ENSMEUG00000015248
N
ZBTB46
Meleagris gallopavo
ENSMGAG00000006811
N
ZBTB46
Microcebus murinus
ENSMICG00000012871
N
ZBTB46
Myotis lucifugus
ENSMLUG00000005283
N
ZBTB46
Macaca mulatta
ENSMMUG00000020712
N
ZBTB46
Monodelphis domestica
ENSMODG00000017020
N
Zbtb46
Mus musculus
ENSMUSG00000027583
N