CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIBMGA010353
(
Bombyx mori
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BGIBMGA010353
T030828_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
crp
M03595_2.00
Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT
SELEX
Nitta et al.(2015)
crp_1
0.903
0.885
crp
M05937_2.00
Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB
B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994
0.903
0.885
hlh-11
M00931_2.00
Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT
PBM
Grove et al.(2009)
HLH11
0.890
0.788
Tfap4
M01717_2.00
Mus musculus
VHCABVYGB
VCRBVTGDB
PBM
Weirauch et al.(2014)
pTH5067
0.854
0.846
TFAP4
M02776_2.00
Homo sapiens
AWCAGCTGWY
RWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_1
0.854
0.846
TFAP4
M02777_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_2
0.854
0.846
TFAP4
M04066_2.00
Homo sapiens
VHCAKVTGDB
VHCABMTGDB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1
0.854
0.846
TFAP4
M04067_2.00
Homo sapiens
VWCAGCTGWB
VWCAGCTGWB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2
0.854
0.846
TFAP4
M04070_2.00
Homo sapiens
RHCAYVTGDB
VHCABRTGDY
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1
0.854
0.846
TFAP4
M04071_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2
0.854
0.846
TFAP4
M08712_2.00
Homo sapiens
VMNCAGCTGR
YCAGCTGNKB
Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A
0.854
0.846
TFAP4
M09453_2.00
Homo sapiens
NVHCAGCTGD
HCAGCTGDBN
Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738
0.854
0.846
TFAP4
M09802_2.00
Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK
Transfac
Matys et al.(2006)
V$AP4_01
0.854
0.846
TFAP4
M09803_2.00
Homo sapiens
NNSAGCTGHB
VDCAGCTSNN
Transfac
Matys et al.(2006)
V$AP4_Q5
0.854
0.846
TFAP4
M09804_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_01
0.854
0.846
TFAP4
M09805_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_02
0.854
0.846
TFAP4
M09806_2.00
Homo sapiens
NVCAGCTGHB
VDCAGCTGBN
Transfac
Matys et al.(2006)
V$AP4_Q6
0.854
0.846
TFAP4
M04068_2.00
Homo sapiens
DHCABMTGDN
NHCAKVTGDH
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1
0.854
0.846
TFAP4
M04069_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2
0.854
0.846
TFAP4
M04072_2.00
Homo sapiens
VHCABVTGDB
VHCABVTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1
0.854
0.846
TFAP4
M04073_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2
0.854
0.846
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA010353-TA
bHLH
8
59
RREIANSNERRRMQSINAGFQALRTLLPRHEGEKLSKAAILQQTAEYIYNLE
Links
Other
bHLH
family TFs
Other
Bombyx mori
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TESG_07518
Trichophyton tonsurans
TESG_07518
N
0.000
PMAA_055610
Talaromyces marneffei
PMAA_055610
N
0.000
PODANS_7_650
Podospora anserina
PODANS_7_650
N
0.000
PTRG_10690
Pyrenophora triticirepentis
PTRG_10690
N
0.000
PTT_05695
Pyrenophora teres
PTT_05695
N
0.000
SAPIO_CDS2052
Scedosporium apiospermum
SAPIO_CDS2052
N
0.000
SETTUDRAFT_153515
Setosphaeria turcica
SETTUDRAFT_153515
N
0.000
SMAC_02038
Sordaria macrospora
SMAC_02038
N
0.000
TEQG_06359
Trichophyton equinum
TEQG_06359
N
0.000
PFICI_12751
Pestalotiopsis fici
PFICI_12751
N
0.000
TRIREDRAFT_58853
Trichoderma reesei
TRIREDRAFT_58853
N
0.000
TSTA_016750
Talaromyces stipitatus
TSTA_016750
N
0.000
V499_03776
Pseudogymnoascus pannorum
V499_03776
N
0.000
estExt_Genewise1.C_170090
Neurospora discreta
estExt_Genewise1.C_170090
N
0.000
NCU05681
Neurospora crassa
NCU05681
N
0.000
AB00152.1
Alternaria brassicicola
AB00152.1
N
0.000
PMAA_055610
Penicillium marneffei
PMAA_055610
N
0.000
H101_07016
Trichophyton interdigitale
H101_07016
N
0.000
CCM_09117
Cordyceps militaris
CCM_09117
N
0.000
CH063_11689
Colletotrichum higginsianum
CH063_11689
N
0.000
CHGG_05369
Chaetomium globosum
CHGG_05369
N
0.000
Cob_05476
Colletotrichum orbiculare
Cob_05476
N
0.000
COCC4DRAFT_156026
Bipolaris maydis
COCC4DRAFT_156026
N
0.000
COCSADRAFT_213113
Bipolaris sorokiniana
COCSADRAFT_213113
N
0.000
CTHT_0072490
Chaetomium thermophilum
CTHT_0072490
N
0.000
GMDG_08515
Pseudogymnoascus destructans
GMDG_08515
N
0.000
ARB_04480
Arthroderma benhamiae
ARB_04480
N
0.000
HCBG_00501
Histoplasma capsulatum
HCBG_00501
N
0.000
MCYG_05885
Arthroderma otae
MCYG_05885
N
0.000
MGYG_06086
Microsporum gypseum
MGYG_06086
N
0.000
MYCTH_2061546
Myceliophthora thermophila
MYCTH_2061546
N
0.000
NEUTE1DRAFT_80790
Neurospora tetrasperma
NEUTE1DRAFT_80790
N
0.000
PAAG_06800
Paracoccidioides sp lutzii
PAAG_06800
N
0.000
PABG_01084
Paracoccidioides brasiliensis
PABG_01084
N
0.000