USF1 (Gorilla gorilla)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGGOG00000003935 T034578_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Usf1
M01732_2.00 		Mus musculus
NRYCACGTGNN
NNCACGTGRYN		 PBM
Weirauch et al.(2014)
pTH4376 		0.914 1.000
USF1
M02792_2.00 		Homo sapiens
RNCACGTGRY
RYCACGTGNY		 SELEX
Jolma et al.(2013)
USF1_1 		0.914 1.000
USF1
M04146_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX 		0.914 1.000
USF1
M08056_2.00 		Homo sapiens
RGTCACRTGVB
VBCAYGTGACY		 ChIP-seq
Mathelier et al.(2014)
MA0093.2 		0.914 1.000
USF1
M07807_2.00 		Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha 		0.914 1.000
USF1
M07808_2.00 		Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha 		0.914 1.000
USF1
M07809_2.00 		Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha 		0.914 1.000
USF1
M07810_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha 		0.914 1.000
USF1
M07811_2.00 		Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha 		0.914 1.000
USF1
M08733_2.00 		Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB		 Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A 		0.914 1.000
Usf1
M08756_2.00 		Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN		 Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A 		0.914 1.000
USF1
M09460_2.00 		Homo sapiens
YCACGTGRBN
NVYCACGTGR		 Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465 		0.914 1.000
USF1
M09867_2.00 		Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN		 Transfac
Matys et al.(2006)
V$USF_01 		0.914 1.000
USF1
M09868_2.00 		Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN		 Transfac
Matys et al.(2006)
V$USF_02 		0.914 1.000
USF1
M09869_2.00 		Homo sapiens
HCACGTGH
DCACGTGD		 Transfac
Matys et al.(2006)
V$USF_C 		0.914 1.000
USF1
M04147_2.00 		Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB		 SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000003861 bHLH 200 255

Links

Other bHLH family TFs
Other Gorilla gorilla TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU06907 Neurospora crassa NCU06907 D
OCS_03275 Ophiocordyceps sinensis OCS_03275 I
S40288_02152 Stachybotrys chartarum S40288_02152 I
S40285_02311 Stachybotrys chlorohalonata S40285_02311 I
PVAR5_7714 Byssochlamys spectabilis PVAR5_7714 I
PV11_04194 Exophiala sideris PV11_04194 I
PV10_00143 Exophiala mesophila PV10_00143 I
PV07_07651 Cladophialophora immunda PV07_07651 I
PV04_04915 Capronia semiimmersa PV04_04915 I
PODANS_5_11890 Podospora anserina PODANS_5_11890 I
PFICI_12570 Pestalotiopsis fici PFICI_12570 I
OIDMADRAFT_103771 Oidiodendron maius OIDMADRAFT_103771 I
SBOR_8019 Sclerotinia borealis SBOR_8019 I
NEUTE1DRAFT_130988 Neurospora tetrasperma NEUTE1DRAFT_130988 I
NechaG38204 Fusarium solani NechaG38204 I
MGU_00040 Metarhizium guizhouense MGU_00040 I
MBR_02972 Metarhizium brunneum MBR_02972 I
MBM_04034 Marssonina brunnea MBM_04034 I
MAPG_04524 Magnaporthe poae MAPG_04524 I
MANI_117684 Metarhizium anisopliae MANI_117684 I
MAM_00034 Metarhizium album MAM_00034 I
MAJ_07370 Metarhizium majus MAJ_07370 I
UV8b_4535 Ustilaginoidea virens UV8b_4535 I
e_gw1.00866.172.1 Aspergillus carbonarius e_gw1.00866.172.1 I
estExt_fgenesh2_pg.C_80281 Neurospora discreta estExt_fgenesh2_pg.C_80281 I
e_gw1.3.1240.1 Nectria haematococca e_gw1.3.1240.1 I
Z518_09813 Rhinocladiella mackenziei Z518_09813 I
Z517_12080 Fonsecaea pedrosoi Z517_12080 I
X797_001037 Metarhizium robertsii X797_001037 I
VHEMI07645 Torrubiella hemipterigena VHEMI07645 I
VDBG_03095 Verticillium alfalfae VDBG_03095 I
VDAG_04003 Verticillium dahliae VDAG_04003 I
V499_09093 Pseudogymnoascus pannorum V499_09093 I
SAPIO_CDS4389 Scedosporium apiospermum SAPIO_CDS4389 I
UCRPA7_7147 Togninia minima UCRPA7_7147 I
UCREL1_8337 Eutypa lata UCREL1_8337 I
TRIVIDRAFT_82456 Trichoderma virens TRIVIDRAFT_82456 I
TRIREDRAFT_121584 Trichoderma reesei TRIREDRAFT_121584 I
TRIATDRAFT_150201 Trichoderma atroviride TRIATDRAFT_150201 I
THITE_2117700 Thielavia terrestris THITE_2117700 I
SPBR_02307 Sporothrix brasiliensis SPBR_02307 I
SMAC_05878 Sordaria macrospora SMAC_05878 I
MAC_04654 Metarhizium acridum MAC_04654 I
CADANGAG00002216 Aspergillus niger CADANGAG00002216 I
Cob_06009 Colletotrichum orbiculare Cob_06009 I
CMQ_5441 Grosmannia clavigera CMQ_5441 I
CH063_01293 Colletotrichum higginsianum CH063_01293 I
CGGC5_13371 Colletotrichum gloeosporioides CGGC5_13371 I
CFIO01_07503 Colletotrichum fioriniae CFIO01_07503 I
CCM_01294 Cordyceps militaris CCM_01294 I
NFIA_066040 Neosartorya fischeri CADNFIAG00006379 I
ATEG_04658 Aspergillus terreus CADATEAG00009335 I
CADAORAG00001279 Aspergillus oryzae CADAORAG00001279 I
ANIA_04873 Aspergillus nidulans CADANIAG00005532 I
CPUR_04347 Claviceps purpurea CPUR_04347 I
AFUA_3G11250 Aspergillus fumigatus CADAFUAG00005698 I
CADAFLAG00002515 Aspergillus flavus CADAFLAG00002515 I
Bcin02g07540 Botrytis cinerea Bcin02g07540 I
BBA_01304 Beauveria bassiana BBA_01304 I
AOL_s00083g463 Arthrobotrys oligospora AOL_s00083g463 I
ACRE_034890 Acremonium chrysogenum ACRE_034890 I
A1O9_00612 Exophiala aquamarina A1O9_00612 I
A1O7_04367 Cladophialophora yegresii A1O7_04367 I
A1O3_01974 Capronia epimyces A1O3_01974 I
A1O1_03114 Capronia coronata A1O1_03114 I
FPSE_01182 Fusarium pseudograminearum FPSE_01182 I
HMPREF1624_02827 Sporothrix schenckii HMPREF1624_02827 I
HMPREF1541_09309 Cyphellophora europaea HMPREF1541_09309 I
HMPREF1120_06603 Exophiala dermatitidis HMPREF1120_06603 I
H072_10673 Dactylellina haptotyla H072_10673 I
GSTUM_00007462001 Tuber melanosporum GSTUM_00007462001 I
GMDG_06980 Pseudogymnoascus destructans GMDG_06980 I
GLRG_01973 Colletotrichum graminicola GLRG_01973 I
GGTG_05592 Gaeumannomyces graminis GGTG_05592 I
G647_04328 Cladophialophora carrionii G647_04328 I
FVEG_04985 Fusarium verticillioides FVEG_04985 I
VDBG_03095 Verticillium albo atrum VDBG_03095 I
FOXG_08063 Fusarium oxysporum FOXG_08063 I
FGRRES_06311 Fusarium graminearum FGRRES_06311 I
FFUJ_13548 Fusarium fujikuroi FFUJ_13548 I
F503_03781 Ophiostoma piceae uamh F503_03781 I
EV44_g6127 Erysiphe necator EV44_g6127 I
EURHEDRAFT_515807 Aspergillus ruber EURHEDRAFT_515807 I
EPUS_07921 Endocarpon pusillum EPUS_07921 I
CTHT_0018750 Chaetomium thermophilum CTHT_0018750 I
CSUB01_04252 Colletotrichum sublineola CSUB01_04252 I