MSGN1 (Loxodonta africana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLAFG00000015319 T034941_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSGN1
M04144_2.00 		Homo sapiens
NVMCAWWTGGYN
NRCCAWWTGKBN		 SELEX
Yin et al.(2017)
MSGN1_eDBD_HT-SELEX 		0.914 1.000
Msgn1
M08772_2.00 		Mus musculus
NNRMCAAATGGY
RCCATTTGKYNN		 Misc
Kulakovskiy et al.(2013)
MSGN1_MOUSE.H11MO.0.C 		0.914 1.000
MSGN1
M04145_2.00 		Homo sapiens
NRMCAWWTGSYN
NRSCAWWTGKYN		 SELEX
Yin et al.(2017)
MSGN1_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000025929 bHLH 124 178

Links

Other bHLH family TFs
Other Loxodonta africana TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CGI_10015535 Crassostrea gigas CGI_10015535 N 0.000
Smp_015670 Schistosoma mansoni Smp_015670 N 0.000
Ocbimv22012140m.g Octopus bimaculoides Ocbimv22012140m.g N 0.000
Sjc_0025520 Schistosoma japonicum Sjc_0025520 N 0.000
C_01193 Schistosoma haematobium C_01193 N 0.000
D915_08122 Fasciola hepatica D915_08122 N 0.000
ECPE_0000624401 Echinostoma caproni ECPE_0000624401 N 0.000
SMRZ_0001688001 Schistosoma margrebowiei SMRZ_0001688001 N 0.000
SMTD_0000782201 Schistosoma mattheei SMTD_0000782201 N 0.000
SROB_0000888801 Schistosoma rodhaini SROB_0000888801 N 0.000
T265_00242 Opisthorchis viverrini T265_00242 N 0.000
TRE_0001588001 Trichobilharzia regenti TRE_0001588001 N 0.000