ENSLOCG00000003538 (Lepisosteus oculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLOCG00000003538 T034995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.914 1.000
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.914 1.000
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.914 1.000
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.914 1.000
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.914 1.000
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.914 1.000
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.914 1.000
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.912 0.962
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.912 0.962
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.912 0.962
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.912 0.962
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.912 0.962
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.912 0.962
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.912 0.962
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.912 0.962
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.912 0.962
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.912 0.962
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.912 0.962
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.912 0.962
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.912 0.962
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.912 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.912 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.912 0.885
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.884 0.923
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.884 0.923
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.884 0.923
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.884 0.885
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.884 0.885
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.884 0.885
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.884 0.885
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.884 0.885
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.884 0.885
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.884 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000004200 bHLH 494 547
ENSLOCP00000004216 bHLH 576 629

Links

Other bHLH family TFs
Other Lepisosteus oculatus TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
THITE_2112671 Thielavia terrestris THITE_2112671 N 0.000
MYCTH_2089183 Myceliophthora thermophila MYCTH_2089183 N 0.000
NechaG92211 Fusarium solani NechaG92211 N 0.000
NEUTE1DRAFT_125863 Neurospora tetrasperma NEUTE1DRAFT_125863 N 0.000
OIDMADRAFT_152191 Oidiodendron maius OIDMADRAFT_152191 N 0.000
PFICI_13325 Pestalotiopsis fici PFICI_13325 N 0.000
PODANS_1_15900 Podospora anserina PODANS_1_15900 N 0.000
S40285_05622 Stachybotrys chlorohalonata S40285_05622 N 0.000
S40288_07943 Stachybotrys chartarum S40288_07943 N 0.000
S40288_09581 Stachybotrys chartarum S40288_09581 N 0.000
SAPIO_CDS4869 Scedosporium apiospermum SAPIO_CDS4869 N 0.000
SBOR_4456 Sclerotinia borealis SBOR_4456 N 0.000
SMAC_00182 Sordaria macrospora SMAC_00182 N 0.000
MGU_06147 Metarhizium guizhouense MGU_06147 N 0.000
TRIATDRAFT_293894 Trichoderma atroviride TRIATDRAFT_293894 N 0.000
TRIREDRAFT_76705 Trichoderma reesei TRIREDRAFT_76705 N 0.000
TRIVIDRAFT_113690 Trichoderma virens TRIVIDRAFT_113690 N 0.000
UV8b_3402 Ustilaginoidea virens UV8b_3402 N 0.000
VDBG_01884 Verticillium alfalfae VDBG_01884 N 0.000
VHEMI05419 Torrubiella hemipterigena VHEMI05419 N 0.000
X797_007680 Metarhizium robertsii X797_007680 N 0.000
estExt_Genewise1Plus.C_70270 Neurospora discreta estExt_Genewise1Plus.C_70270 N 0.000
fgenesh1_pm.sca_54_chr3_4_0000024 Nectria haematococca fgenesh1_pm.sca_54_chr3_4_0000024 N 0.000
vad-6 Neurospora crassa NCU09205 N 0.000
estExt_Genewise1Plus.C_110189 Cryphonectria parasitica estExt_Genewise1Plus.C_110189 N 0.000
FGRRES_16399 Fusarium graminearum FGRRES_16399 N 0.000
ACRE_090530 Acremonium chrysogenum ACRE_090530 N 0.000
BBA_05678 Beauveria bassiana BBA_05678 N 0.000
BBA_09096 Beauveria bassiana BBA_09096 N 0.000
Bcin08g05570 Botrytis cinerea Bcin08g05570 N 0.000
CCM_07309 Cordyceps militaris CCM_07309 N 0.000
CFIO01_05100 Colletotrichum fioriniae CFIO01_05100 N 0.000
CGGC5_7812 Colletotrichum gloeosporioides CGGC5_7812 N 0.000
CH063_07963 Colletotrichum higginsianum CH063_07963 N 0.000
Cob_02607 Colletotrichum orbiculare Cob_02607 N 0.000
CPUR_04593 Claviceps purpurea CPUR_04593 N 0.000
CSUB01_00007 Colletotrichum sublineola CSUB01_00007 N 0.000
FFUJ_05577 Fusarium fujikuroi FFUJ_05577 N 0.000
VDBG_01884 Verticillium albo atrum VDBG_01884 N 0.000
FPSE_05593 Fusarium pseudograminearum FPSE_05593 N 0.000
FVEG_13110 Fusarium verticillioides FVEG_13110 N 0.000
GGTG_04996 Gaeumannomyces graminis GGTG_04996 N 0.000
HMPREF1624_04976 Sporothrix schenckii HMPREF1624_04976 N 0.000
MAC_07722 Metarhizium acridum MAC_07722 N 0.000
MAC_08257 Metarhizium acridum MAC_08257 N 0.000
MAJ_06521 Metarhizium majus MAJ_06521 N 0.000
MAM_07708 Metarhizium album MAM_07708 N 0.000
MANI_114498 Metarhizium anisopliae MANI_114498 N 0.000
MBR_06341 Metarhizium brunneum MBR_06341 N 0.000
MGG_09002 Magnaporthe oryzae MGG_09002 N 0.000