CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMEUG00000014270
(
Macropus eugenii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMEUG00000014270
T035157_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYOD1
M04116_2.00
Homo sapiens
BAACASSTGNYV
BRNCASSTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1
0.914
1.000
MYOD1
M04117_2.00
Homo sapiens
BRVCASMTGDCG
CGHCAKSTGBYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2
0.914
1.000
MYOD1
M04120_2.00
Homo sapiens
NAACASSTGNYV
BRNCASSTGTTN
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1
0.914
1.000
MYOD1
M04121_2.00
Homo sapiens
BRMCASCTGDCR
YGHCAGSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2
0.914
1.000
Myod1
M08060_2.00
Mus musculus
NVNRRCAGSTGBN
NVCASCTGYYNBN
ChIP-seq
Mathelier et al.(2014)
MA0499.1
0.914
1.000
MYOD1
M08724_2.00
Homo sapiens
NVNNRNRRCAGCTGN
NCAGCTGYYNYNNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A
0.914
1.000
Myod1
M08745_2.00
Mus musculus
NVNRRNRRCAGSTGB
VCASCTGYYNYYNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A
0.914
1.000
MYOD1
M09838_2.00
Homo sapiens
HRVCACCTGHBB
VVDCAGGTGBYD
Transfac
Matys et al.(2006)
V$MYOD_01
0.914
1.000
MYOD1
M09839_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOD_Q6_02
0.914
1.000
MYOD1
M09840_2.00
Homo sapiens
NVCABCTGNY
RNCAGVTGBN
Transfac
Matys et al.(2006)
V$MYOD_Q6
0.914
1.000
MYOD1
M04118_2.00
Homo sapiens
BAACANVTGTYV
BRACABNTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1
0.914
1.000
MYOD1
M04119_2.00
Homo sapiens
BRRCASSTGDCR
YGHCASSTGYYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2
0.914
1.000
MYOD1
M04122_2.00
Homo sapiens
NAMCASSTGBYV
BRVCASSTGKTN
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1
0.914
1.000
MYOD1
M04123_2.00
Homo sapiens
BRMCASVTGNCR
YGNCABSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2
0.914
1.000
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.866
0.885
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.866
0.885
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.866
0.885
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY
RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.866
0.885
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.866
0.885
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY
RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.840
0.904
MYF5
M09821_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.840
0.904
MYOG
M04098_2.00
Homo sapiens
BRACAGCTGWCR
YGWCAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1
0.839
0.788
MYOG
M04099_2.00
Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2
0.839
0.788
MYOG
M04102_2.00
Homo sapiens
NRACARCTGWCR
YGWCAGYTGTYN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1
0.839
0.788
MYOG
M04103_2.00
Homo sapiens
NAACARYTGTYN
NRACARYTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2
0.839
0.788
Myog
M08061_2.00
Mus musculus
RRCAGCTGVNN
NNBCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0500.1
0.839
0.788
MYOG
M08721_2.00
Homo sapiens
BHVCAGCTGYYNB
VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B
0.839
0.788
Myog
M08755_2.00
Mus musculus
BHVCAGCTGYYNB
VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A
0.839
0.788
Myog
M09469_2.00
Mus musculus
RACAGCTG
CAGCTGTY
Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024
0.839
0.788
MYOG
M09829_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01
0.839
0.788
MYOG
M09830_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6
0.839
0.788
MYOG
M04100_2.00
Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1
0.839
0.788
MYOG
M04101_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2
0.839
0.788
MYOG
M04104_2.00
Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1
0.839
0.788
MYOG
M04105_2.00
Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2
0.839
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000013025
bHLH
107
158
RRKAATMRERRRLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQ
Links
Other
bHLH
family TFs
Other
Macropus eugenii
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_005_00404
Aquilegia coerulea
Aquca_005_00404
N
Solyc07g063940.1
Solanum lycopersicum
Solyc07g063940.1
N
Solyc12g005340.1
Solanum lycopersicum
Solyc12g005340.1
N
TCM_031132
Theobroma cacao
TCM_031132
N
Traes_2AS_620B821281
Triticum aestivum
Traes_2AS_620B821281
N
Traes_2BS_4600D4B54
Triticum aestivum
Traes_2BS_4600D4B54
N
Traes_2DS_2D035BAFD
Triticum aestivum
Traes_2DS_2D035BAFD
N
TRIUR3_35245
Triticum urartu
TRIUR3_35245
N
VIT_19s0014g04940
Vitis vinifera
VIT_19s0014g04940
N
Ca_06943
Cicer arietinum
Ca_06943
N
Pm029452
Prunus mume
Pm029452
N
cassava24578.valid.m1
Manihot esculenta
cassava24578.valid.m1
N
Cucsa.053270
Cucumis sativus
Cucsa.053270
N
mgf007614m
Mimulus guttatus
mgf007614m
N
Si029156m.g
Setaria italica
Si029156m.g
N
Ciclev10007843m.g
Citrus clementina
Ciclev10007843m.g
N
Eucgr.F03414
Eucalyptus grandis
Eucgr.F03414
N
Gorai.002G080600
Gossypium raimondii
Gorai.002G080600
N
Gorai.009G427800
Gossypium raimondii
Gorai.009G427800
N
Gorai.013G164700
Gossypium raimondii
Gorai.013G164700
N
Lus10035840.g
Linum usitatissimum
Lus10035840.g
N
Lus10036623.g
Linum usitatissimum
Lus10036623.g
N
MDP0000205622
Malus domestica
MDP0000205622
N
Pavir.Bb02923
Panicum virgatum
Pavir.Bb02923
N
Pavir.J35699
Panicum virgatum
Pavir.J35699
N
SapurV1A.0327s0070
Salix purpurea
SapurV1A.0327s0070
N
SapurV1A.0664s0120
Salix purpurea
SapurV1A.0664s0120
N
PK07026.1
Cannabis sativa
PK07026.1
N
OGLUM07G17420
Oryza glumaepatula
OGLUM07G17420
N
BGIOSGA025902
Oryza indica
BGIOSGA025902
N
BRADI1G25370
Brachypodium distachyon
BRADI1G25370
N
F775_07373
Aegilops tauschii
F775_07373
N
GLYMA06G41500
Glycine max
GLYMA06G41500
N
GLYMA12G16750
Glycine max
GLYMA12G16750
N
GLYMA12G34420
Glycine max
GLYMA12G34420
N
GLYMA13G36120
Glycine max
GLYMA13G36120
N
GRMZM5G821439
Zea mays
GRMZM5G821439
N
GSMUA_Achr6G24310_001
Musa acuminata
GSMUA_Achr6G24310_001
N
MLOC_37712
Hordeum vulgare
MLOC_37712
N
MTR_2g082090
Medicago truncatula
MTR_2g082090
N
OB07G23640
Oryza brachyantha
OB07G23640
N
OBART07G17780
Oryza barthii
OBART07G17780
N
AMTR_s00043p00136400
Amborella trichopoda
AMTR_s00043p00136400
N
OLONG_024541
Oryza longistaminata
OLONG_024541
N
OMERI07G14660
Oryza meridionalis
OMERI07G14660
N
ONIVA07G16090
Oryza nivara
ONIVA07G16090
N
OPUNC07G16570
Oryza punctata
OPUNC07G16570
N
ORGLA07G0142600
Oryza glaberrima
ORGLA07G0142600
N
ORUFI07G18480
Oryza rufipogon
ORUFI07G18480
N
CIGR1
Oryza sativa
OS07G0545800
N
PGSC0003DMG400019232
Solanum tuberosum
PGSC0003DMG400019232
N
PGSC0003DMG400021802
Solanum tuberosum
PGSC0003DMG400021802
N
POPTR_0001s44090
Populus trichocarpa
POPTR_0001s44090
N
POPTR_0011s13460
Populus trichocarpa
POPTR_0011s13460
N
PRUPE_ppa003323mg
Prunus persica
PRUPE_ppa003323mg
N
Sb02g035680
Sorghum bicolor
Sb02g035680
N