CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TCF12 *(Myotis lucifugus)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSMLUG00000006205	T035315_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Tcf12 M01740_2.00	Mus musculus	NVCAYCTGB	VCAGRTGBN	PBM Weirauch et al.(2014) pTH5071	0.914	1.000
TCF12 M04137_2.00	Homo sapiens	VCACSTGB	VCASGTGB	SELEX Yin et al.(2017) TCF12_eDBD_HT-SELEX	0.914	1.000
Tcf12 M08062_2.00	Mus musculus	RRCAGCTGNNN	NNNCAGCTGYY	ChIP-seq Mathelier et al.(2014) MA0521.1	0.914	1.000
TCF12 M07805_2.00	Homo sapiens	NVDSCAGSTGB	VCASCTGSHBN	ChIP-seq Gerstein et al.(2012) GM12878_TCF12_HudsonAlpha	0.914	1.000
TCF12 M07806_2.00	Homo sapiens	VCASCTGB	VCAGSTGB	ChIP-seq Gerstein et al.(2012) H1-hESC_TCF12_HudsonAlpha	0.914	1.000
TCF12 M08731_2.00	Homo sapiens	CMCASCTGSH	DSCAGSTGKG	Misc Kulakovskiy et al.(2013) HTF4_HUMAN.H11MO.0.A	0.914	1.000
Tcf12 M08762_2.00	Mus musculus	VMCASCTGSH	DSCAGSTGKB	Misc Kulakovskiy et al.(2013) HTF4_MOUSE.H11MO.0.A	0.914	1.000
TCF12 M09458_2.00	Homo sapiens	NNVCAGCTGB	VCAGCTGBNN	Misc Heinz et al.(2010) GM12878-Tcf12_GSE32465	0.914	1.000
TCF12 M09858_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HEB_Q6	0.914	1.000
TCF12 M09859_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HTF4_Q2	0.914	1.000
TCF12 M09860_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF12_01	0.914	1.000
TCF12 M09861_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF12_03	0.914	1.000
TCF12 M09862_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF12_05	0.914	1.000
TCF12 M04138_2.00	Homo sapiens	NCAYCTGN	NCAGRTGN	SELEX Yin et al.(2017) TCF12_eDBD_Methyl-HT-SELEX	0.914	1.000
Tcf3 M00753_2.00	Mus musculus	VCACCTGBN	NVCAGGTGB	PBM Weirauch et al.(2013) pTH3866	0.914	0.885
Tcf3 M01723_2.00	Mus musculus	NNVCACSTGB	VCASGTGBNN	PBM Weirauch et al.(2014) pTH4580	0.914	0.885
Tcf3 M00118_2.00	Mus musculus	VCAYCTGB	VCAGRTGB	PBM Badis et al.(2009) Tcfe2a_3865	0.914	0.885
Tcf4 M01750_2.00	Mus musculus	VCAGVTGBN	NVCABCTGB	PBM Weirauch et al.(2014) pTH5101	0.912	0.962
TCF4 M02807_2.00	Homo sapiens	HRCACCTGBN	NVCAGGTGYD	SELEX Jolma et al.(2013) TCF4_1	0.912	0.962
TCF4 M02808_2.00	Homo sapiens	NVCACCTBBN	NVVAGGTGBN	SELEX Jolma et al.(2013) TCF4_2	0.912	0.962
TCF4 M02728_2.00	Homo sapiens	RCACCTG	CAGGTGY	SELEX Jolma et al.(2010) TCF4_dimer	0.912	0.962
TCF4 M04214_2.00	Homo sapiens	VCACCTGB	VCAGGTGB	SELEX Yin et al.(2017) TCF4_eDBD_HT-SELEX	0.912	0.962
Tcf4 M08775_2.00	Mus musculus	HRCACCTGB	VCAGGTGYD	Misc Kulakovskiy et al.(2013) ITF2_MOUSE.H11MO.0.B	0.912	0.962
TCF4 M09461_2.00	Homo sapiens	ASWTCAAAGRVN	NBYCTTTGAWST	Misc Heinz et al.(2010) Hct116-Tcf4_SRA012054	0.912	0.962
TCF4 M04215_2.00	Homo sapiens	VCACCTGN	NCAGGTGB	SELEX Yin et al.(2017) TCF4_eDBD_Methyl-HT-SELEX	0.912	0.962
Tcf3 M09465_2.00	Mus musculus	ABWTCAAAGS	SCTTTGAWVT	Misc Heinz et al.(2010) mES-Tcf3_GSE11724	0.886	0.962
Tcf3 M09466_2.00	Mus musculus	VCAGCTGBNN	NNVCAGCTGB	Misc Heinz et al.(2010) proBcell-E2A_GSE21978	0.886	0.962
Tcf3 M09886_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E47_05	0.886	0.962
TCF3 M02775_2.00	Homo sapiens	NVCACCTGBN	NVCAGGTGBN	SELEX Jolma et al.(2013) TCF3_1	0.886	0.923
TCF3 M08710_2.00	Homo sapiens	VVCASCTGCHN	NDGCAGSTGBB	Misc Kulakovskiy et al.(2013) TFE2_HUMAN.H11MO.0.A	0.886	0.923
TCF3 M09791_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E12_Q6	0.886	0.923
TCF3 M09792_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E2A_Q6_01	0.886	0.923
TCF3 M09793_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E2A_Q6_02	0.886	0.923
TCF3 M09794_2.00	Homo sapiens	VVVVMCACCTGCNBB	VVNGCAGGTGKBBBB	Transfac Matys et al.(2006) V$E47_01	0.886	0.923
TCF3 M09795_2.00	Homo sapiens	NNKWRCACCTGYDNNN	NNNHRCAGGTGYWMNN	Transfac Matys et al.(2006) V$E47_02	0.886	0.923
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSMLUP00000005682	bHLH	468	521	RRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLE

Links
Other bHLH family TFs
Other *Myotis lucifugus* TFs

212 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
PV11_02684	Exophiala sideris	PV11_02684	N	0.000
PCH_Pc21g17490	Penicillium rubens	PCH_Pc21g17490	N	0.000
PDE_09355	Penicillium oxalicum	PDE_09355	N	0.000
PMAA_036960	Talaromyces marneffei	PMAA_036960	N	0.000
PV04_03557	Capronia semiimmersa	PV04_03557	N	0.000
PV04_03941	Capronia semiimmersa	PV04_03941	N	0.000
PV05_05879	Exophiala xenobiotica	PV05_05879	N	0.000
PV05_07172	Exophiala xenobiotica	PV05_07172	N	0.000
PV06_00153	Exophiala oligosperma	PV06_00153	N	0.000
PV07_04661	Cladophialophora immunda	PV07_04661	N	0.000
PV07_06727	Cladophialophora immunda	PV07_06727	N	0.000
PV08_09743	Exophiala spinifera	PV08_09743	N	0.000
PV10_05359	Exophiala mesophila	PV10_05359	N	0.000
PV11_00858	Exophiala sideris	PV11_00858	N	0.000
MGYG_03712	Microsporum gypseum	MGYG_03712	N	0.000
PVAR5_7243	Byssochlamys spectabilis	PVAR5_7243	N	0.000
SETTUDRAFT_27878	Setosphaeria turcica	SETTUDRAFT_27878	N	0.000
TSTA_055160	Talaromyces stipitatus	TSTA_055160	N	0.000
Z517_05815	Fonsecaea pedrosoi	Z517_05815	N	0.000
Z517_10400	Fonsecaea pedrosoi	Z517_10400	N	0.000
Z518_01292	Rhinocladiella mackenziei	Z518_01292	N	0.000
Z518_11251	Rhinocladiella mackenziei	Z518_11251	N	0.000
Z519_02290	Cladophialophora bantiana	Z519_02290	N	0.000
Z519_06883	Cladophialophora bantiana	Z519_06883	N	0.000
estExt_Genewise1Plus.C_150467	Cochliobolus heterostrophus C5	estExt_Genewise1Plus.C_150467	N	0.000
fgenesh1_pm.00162_#_137	Aspergillus carbonarius	fgenesh1_pm.00162_#_137	N	0.000
Pc21g17490	Penicillium chrysogenum	Pc21g17490	N	0.000
PMAA_036960	Penicillium marneffei	PMAA_036960	N	0.000
NFIA_036720	Neosartorya fischeri	CADNFIAG00003562	N	0.000
MCYG_06896	Microsporum canis	MCYG_06896	N	0.000
SNOG_05707	Stagonospora nodorum	SNOG_05707	N	0.000
A1O1_08721	Capronia coronata	A1O1_08721	N	0.000
A1O3_08106	Capronia epimyces	A1O3_08106	N	0.000
A1O5_04458	Cladophialophora psammophila	A1O5_04458	N	0.000
A1O5_11083	Cladophialophora psammophila	A1O5_11083	N	0.000
A1O7_03367	Cladophialophora yegresii	A1O7_03367	N	0.000
A1O9_03441	Exophiala aquamarina	A1O9_03441	N	0.000
A1O9_12648	Exophiala aquamarina	A1O9_12648	N	0.000
BDDG_09052	Blastomyces dermatitidis	BDDG_09052	N	0.000
AFUA_5G06410	Aspergillus fumigatus	CADAFUAG00006238	N	0.000
CADANGAG00013526	Aspergillus niger	CADANGAG00013526	N	0.000
ATEG_09390	Aspergillus terreus	CADATEAG00008360	N	0.000
CIMG_06012	Coccidioides immitis	CIMG_06012	N	0.000
CPC735_025940	Coccidioides posadasii	CPC735_025940	N	0.000
EPUS_04193	Endocarpon pusillum	EPUS_04193	N	0.000
EURHEDRAFT_414224	Aspergillus ruber	EURHEDRAFT_414224	N	0.000
G647_03415	Cladophialophora carrionii	G647_03415	N	0.000
G647_05017	Cladophialophora carrionii	G647_05017	N	0.000
H101_07203	Trichophyton interdigitale	H101_07203	N	0.000
H102_04274	Trichophyton rubrum	H102_04274	N	0.000
H105_04299	Trichophyton soudanense	H105_04299	N	0.000
HMPREF1120_04992	Exophiala dermatitidis	HMPREF1120_04992	N	0.000
HMPREF1120_09222	Exophiala dermatitidis	HMPREF1120_09222	N	0.000
HMPREF1541_04963	Cyphellophora europaea	HMPREF1541_04963	N	0.000
HMPREF1541_06758	Cyphellophora europaea	HMPREF1541_06758	N	0.000
MCYG_06896	Arthroderma otae	MCYG_06896	N	0.000

TCF12 (Myotis lucifugus) bHLH

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

212 Related TFs

TCF12 **(Myotis lucifugus)
bHLH**