CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUROD4
(
Myotis lucifugus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMLUG00000028491
T035366_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.880
0.885
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.880
0.885
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.880
0.885
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.880
0.885
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.880
0.885
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.880
0.885
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.880
0.885
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.880
0.885
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.845
0.865
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.845
0.865
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.845
0.865
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.845
0.865
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.845
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000020618
bHLH
88
140
RRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALS
Links
Other
bHLH
family TFs
Other
Myotis lucifugus
TFs
269 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Clk
Drosophila melanogaster
FBgn0023076
D
RPRC002110
Rhodnius prolixus
RPRC002110
I
PPAI002844
Phlebotomus papatasi
PPAI002844
I
HHAL003628-PA
Halyomorpha halys
HHAL003628-PA
I
CLEC000211
Cimex lectularius
CLEC000211
I
Hsal_05831--XP_394233.3_APIME
Harpegnathos saltator
Hsal_05831--XP_394233.3_APIME
I
Cflo_02744--XP_394233.3_APIME
Camponotus floridanus
Cflo_02744--XP_394233.3_APIME
I
YQE_03736
Dendroctonus ponderosae
YQE_03736
I
TC000088
Tribolium castaneum
TC000088
I
PHUM426300
Pediculus humanus
PHUM426300
I
MCINX000525
Melitaea cinxia
MCINX000525
I
KGM_10878
Danaus plexippus
KGM_10878
I
HMEL008784
Heliconius melpomene
HMEL008784
I
GB48028
Apis mellifera
GB48028
I
GE20390
Drosophila yakuba
FBgn0237706
I
GK10694
Drosophila willistoni
FBgn0212707
I
GM24989
Drosophila sechellia
FBgn0179850
I
GL17825
Drosophila persimilis
FBgn0155428
I
GI12195
Drosophila mojavensis
FBgn0134952
I
GH16514
Drosophila grimshawi
FBgn0123985
I
GG14938
Drosophila erecta
FBgn0107192
I
GF24152
Drosophila ananassae
FBgn0101146
I
GD13034
Drosophila simulans
FBgn0184756
I
GA20318
Drosophila pseudoobscura
FBgn0080313
I
DAPPUDRAFT_346996
Daphnia pulex
DAPPUDRAFT_346996
I
ACEP20954
Atta cephalotes
ACEP20954
I
ADIR007538
Anopheles dirus
ADIR007538
N
AAEL012562
Aedes aegypti
AAEL012562
N
AEPI008163
Anopheles epiroticus
AEPI008163
N
AFAF004824
Anopheles farauti
AFAF004824
N
AFUN011810
Anopheles funestus
AFUN011810
N
AMEC012294
Anopheles melas
AMEC012294
N
AMEM015248
Anopheles merus
AMEM015248
N
AMIN011013
Anopheles minimus
AMIN011013
N
AQUA011172
Anopheles quadriannulatus
AQUA011172
N
ASTEI06385
Anopheles stephensi
ASTEI06385
N
ACUA003634
Anopheles culicifacies
ACUA003634
N
ACOM031194
Anopheles coluzzii
ACOM031194
N
ACHR008870
Anopheles christyi
ACHR008870
N
AATE001068
Anopheles atroparvus
AATE001068
N
AARA005712
Anopheles arabiensis
AARA005712
N
AALB004151
Anopheles albimanus
AALB004151
N
ADAC005680
Anopheles darlingi
ADAC005680
N
CLK
Anopheles gambiae
AGAP005711
N
CPIJ002146
Culex quinquefasciatus
CPIJ002146
N
CpipJ_CPIJ002146
Culex pipiens
CpipJ_CPIJ002146
N