Tcf21 (Mus musculus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMUSG00000045680 T035733_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00		 Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087		 (Direct) (Direct)
Tcf21
M02819_2.00		 Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.914 1.000
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.914 1.000
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.914 0.981
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.914 0.981
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.914 0.981
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.914 0.981
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.914 0.981
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.914 0.981
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.914 0.981
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01746_2.00 bHLH 17 69

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000053178 bHLH 80 132

Links

Other bHLH family TFs
Other Mus musculus TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TFAP4 Homo sapiens ENSG00000090447 D 0.000
Tfap4 Mus musculus ENSMUSG00000005718 D 0.000
ENSPSIG00000009002 Pelodiscus sinensis ENSPSIG00000009002 I 0.000
tfap4 Tetraodon nigroviridis ENSTNIG00000014095 I 0.000
tfap4 Tetraodon nigroviridis ENSTNIG00000009740 I 0.000
tfap4 Tetraodon nigroviridis ENSTNIG00000002015 I 0.000
TFAP4 Tupaia belangeri ENSTBEG00000014089 I 0.000
ENSSTOG00000028040 Ictidomys tridecemlineatus ENSSTOG00000028040 I 0.000
ENSSHAG00000011487 Sarcophilus harrisii ENSSHAG00000011487 I 0.000
Tfap4 Rattus norvegicus ENSRNOG00000005227 I 0.000
ENSPVAG00000005418 Pteropus vampyrus ENSPVAG00000005418 I 0.000
TFAP4 Pan troglodytes ENSPTRG00000007713 I 0.000
tfap4 Takifugu rubripes ENSTRUG00000006111 I 0.000
ENSPPYG00000007054 Pongo abelii ENSPPYG00000007054 I 0.000
ENSPFOG00000011355 Poecilia formosa ENSPFOG00000011355 I 0.000
ENSPFOG00000000836 Poecilia formosa ENSPFOG00000000836 I 0.000
TFAP4 Procavia capensis ENSPCAG00000011134 I 0.000
ENSPANG00000010499 Papio anubis ENSPANG00000010499 I 0.000
tfap4 Oryzias latipes ENSORLG00000015050 I 0.000
tfap4 Oryzias latipes ENSORLG00000008286 I 0.000
ENSOPRG00000001061 Ochotona princeps ENSOPRG00000001061 I 0.000
ENSONIG00000016338 Oreochromis niloticus ENSONIG00000016338 I 0.000
Cmyd_10017689 Chelonia mydas Cmyd_10017689 I 0.000
LLOJ009485 Lutzomyia longipalpis LLOJ009485 I 0.000
tfap4 Xenopus tropicalis XB-GENE-999265 I 0.000
Sakowv30040946m.g Saccoglossus kowalevskii Sakowv30040946m.g I 0.000
fgenesh2_pg.scaffold_326000054 Branchiostoma floridae fgenesh2_pg.scaffold_326000054 I 0.000
estExt_fgenesh2_pg.C_3260041 Branchiostoma floridae estExt_fgenesh2_pg.C_3260041 I 0.000
Pvit_18996 Pogona vitticeps Pvit_18996 I 0.000
Ogr05167 Ophisaurus gracilis Ogr05167 I 0.000
Myotis_brandtii_TFAP4_10028039 Myotis brandtii Myotis_brandtii_TFAP4_10028039 I 0.000
ENSP00000204517 Macaca fascicularis ENSP00000204517 I 0.000
ENSP00000204517-D1 Bos grunniens ENSP00000204517-D1 I 0.000
TFAP4 Otolemur garnettii ENSOGAG00000008955 I 0.000
Alligator_sinensis_CCG004455.1 Alligator sinensis Alligator_sinensis_CCG004455.1 I 0.000
NEMVEDRAFT_v1g112080 Nematostella vectensis NEMVEDRAFT_v1g112080 I 0.000
L798_07621 Zootermopsis nevadensis L798_07621 I 0.000
GB48999 Apis mellifera GB48999 I 0.000
ENSXMAG00000011968 Xiphophorus maculatus ENSXMAG00000011968 I 0.000
ENSXMAG00000004632 Xiphophorus maculatus ENSXMAG00000004632 I 0.000
TFAP4 Vicugna pacos ENSVPAG00000008001 I 0.000
TFAP4 Tursiops truncatus ENSTTRG00000002710 I 0.000
tfap4 Takifugu rubripes ENSTRUG00000013344 I 0.000
TFAP4 Callithrix jacchus ENSCJAG00000019756 I 0.000
TFAP4 Echinops telfairi ENSETEG00000008634 I 0.000
TFAP4 Erinaceus europaeus ENSEEUG00000006004 I 0.000
TFAP4 Equus caballus ENSECAG00000022311 I 0.000
Tfap4 Dipodomys ordii ENSDORG00000004656 I 0.000
TFAP4 Dasypus novemcinctus ENSDNOG00000039193 I 0.000
tfap4 Danio rerio ENSDARG00000103923 I 0.000
ENSCSAVG00000000333 Ciona savignyi ENSCSAVG00000000333 I 0.000
ENSCSAG00000009620 Chlorocebus sabaeus ENSCSAG00000009620 I 0.000
TFAP4 Cavia porcellus ENSCPOG00000004174 I 0.000
ENSFALG00000004331 Ficedula albicollis ENSFALG00000004331 I 0.000
ENSCING00000014406 Ciona intestinalis ENSCING00000014406 I 0.000
TFAP4 Canis familiaris ENSCAFG00000019231 I 0.000
TFAP4 Bos taurus ENSBTAG00000033174 I 0.000
ENSAPLG00000013446 Anas platyrhynchos ENSAPLG00000013446 I 0.000
ENSAMEG00000002016 Ailuropoda melanoleuca ENSAMEG00000002016 I 0.000
TFAP4 Anolis carolinensis ENSACAG00000016352 I 0.000
DAPPUDRAFT_303137 Daphnia pulex DAPPUDRAFT_303137 I 0.000
CGI_10026909 Crassostrea gigas CGI_10026909 I 0.000
CapteG45346 Capitella teleta CapteG45346 I 0.000
ENSMEUG00000000888 Macropus eugenii ENSMEUG00000000888 I 0.000
AGAP010201 Anopheles gambiae AGAP010201 I 0.000
TFAP4 Oryctolagus cuniculus ENSOCUG00000024550 I 0.000
ENSOARG00000003120 Ovis aries ENSOARG00000003120 I 0.000
TFAP4 Ornithorhynchus anatinus ENSOANG00000019858 I 0.000
ENSNLEG00000009797 Nomascus leucogenys ENSNLEG00000009797 I 0.000
ENSMPUG00000015023 Mustela putorius furo ENSMPUG00000015023 I 0.000
TFAP4 Monodelphis domestica ENSMODG00000016377 I 0.000
TFAP4 Myotis lucifugus ENSMLUG00000005725 I 0.000
TFAP4 Meleagris gallopavo ENSMGAG00000009411 I 0.000
ENSONIG00000005196 Oreochromis niloticus ENSONIG00000005196 I 0.000
ENSLOCG00000002626 Lepisosteus oculatus ENSLOCG00000002626 I 0.000
TFAP4 Loxodonta africana ENSLAFG00000022341 I 0.000
ENSLACG00000000328 Latimeria chalumnae ENSLACG00000000328 I 0.000
ENSGMOG00000015232 Gadus morhua ENSGMOG00000015232 I 0.000
ENSGMOG00000014930 Gadus morhua ENSGMOG00000014930 I 0.000
TFAP4 Gorilla gorilla ENSGGOG00000000451 I 0.000
tfap4 Gasterosteus aculeatus ENSGACG00000018768 I 0.000
tfap4 Gasterosteus aculeatus ENSGACG00000011329 I 0.000
TFAP4 Felis catus ENSFCAG00000011227 I 0.000