ENSONIG00000012720 (Oreochromis niloticus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSONIG00000012720 T036240_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.914 1.000
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.914 1.000
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.914 1.000
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.914 1.000
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.914 1.000
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.914 1.000
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.914 1.000
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.912 0.962
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.912 0.962
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.912 0.962
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.912 0.962
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.912 0.962
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.912 0.962
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.912 0.962
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.912 0.962
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.912 0.962
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.912 0.962
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.912 0.962
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.912 0.962
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.912 0.962
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.912 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.912 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.912 0.885
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.884 0.923
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.884 0.923
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.884 0.923
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.884 0.885
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.884 0.885
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.884 0.885
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.884 0.885
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.884 0.885
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.884 0.885
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.884 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000016008 bHLH 583 636
ENSONIP00000016009 bHLH 419 472

Links

Other bHLH family TFs
Other Oreochromis niloticus TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCHCODRAFT_67234 Schizophyllum commune SCHCODRAFT_67234 D 0.000
A1O1_04014 Capronia coronata A1O1_04014 I 0.000
AGABI2DRAFT_113594 Agaricus bisporus AGABI2DRAFT_113594 I 0.000
AGABI2DRAFT_137096 Agaricus bisporus AGABI2DRAFT_137096 I 0.000
AGABI2DRAFT_187697 Agaricus bisporus AGABI2DRAFT_187697 I 0.000
AGABI2DRAFT_193390 Agaricus bisporus AGABI2DRAFT_193390 I 0.000
AGABI2DRAFT_206331 Agaricus bisporus AGABI2DRAFT_206331 I 0.000
AGABI2DRAFT_222360 Agaricus bisporus AGABI2DRAFT_222360 I 0.000
AGABI2DRAFT_223295 Agaricus bisporus AGABI2DRAFT_223295 I 0.000
AGABI2DRAFT_223670 Agaricus bisporus AGABI2DRAFT_223670 I 0.000
BN946_scf185008.g7 Trametes cinnabarina BN946_scf185008.g7 I 0.000
BOTBODRAFT_483871 Botryobasidium botryosum BOTBODRAFT_483871 I 0.000
CADANGAG00004715 Aspergillus niger CADANGAG00004715 I 0.000
CC1G_09022 Coprinopsis cinerea CC1G_09022 I 0.000
CC1G_12055 Coprinopsis cinerea CC1G_12055 I 0.000
CC1G_13782 Coprinopsis cinerea CC1G_13782 I 0.000
CC1G_15052 Coprinopsis cinerea CC1G_15052 I 0.000
CC1G_15575 Coprinopsis cinerea CC1G_15575 I 0.000
CERSUDRAFT_112795 Ceriporiopsis subvermispora CERSUDRAFT_112795 I 0.000
CERSUDRAFT_133798 Ceriporiopsis subvermispora CERSUDRAFT_133798 I 0.000
CERSUDRAFT_46791 Ceriporiopsis subvermispora CERSUDRAFT_46791 I 0.000
CH063_07756 Colletotrichum higginsianum CH063_07756 I 0.000
CNA02020 Cryptococcus neoformans CNA02020 I 0.000
CNE00840 Cryptococcus neoformans CNE00840 I 0.000
CNH00480 Cryptococcus neoformans CNH00480 I 0.000
CNJ02660 Cryptococcus neoformans CNJ02660 I 0.000
CNN00100 Cryptococcus neoformans CNN00100 I 0.000
CSUB01_05661 Colletotrichum sublineola CSUB01_05661 I 0.000
CY34DRAFT_11126 Suillus luteus CY34DRAFT_11126 I 0.000
CY34DRAFT_492980 Suillus luteus CY34DRAFT_492980 I 0.000
CY34DRAFT_798473 Suillus luteus CY34DRAFT_798473 I 0.000
DACRYDRAFT_21143 Dacryopinax sp DACRYDRAFT_21143 I 0.000
DACRYDRAFT_44659 Dacryopinax sp DACRYDRAFT_44659 I 0.000
F503_07103 Ophiostoma piceae uamh F503_07103 I 0.000
FOMPIDRAFT_1030155 Fomitopsis pinicola FOMPIDRAFT_1030155 I 0.000
FOMPIDRAFT_1142296 Fomitopsis pinicola FOMPIDRAFT_1142296 I 0.000
FOMPIDRAFT_1162266 Fomitopsis pinicola FOMPIDRAFT_1162266 I 0.000
FOMPIDRAFT_148963 Fomitopsis pinicola FOMPIDRAFT_148963 I 0.000
GALMADRAFT_129710 Galerina marginata GALMADRAFT_129710 I 0.000
GALMADRAFT_161257 Galerina marginata GALMADRAFT_161257 I 0.000
GALMADRAFT_222679 Galerina marginata GALMADRAFT_222679 I 0.000
GALMADRAFT_235239 Galerina marginata GALMADRAFT_235239 I 0.000
GALMADRAFT_57068 Galerina marginata GALMADRAFT_57068 I 0.000
GALMADRAFT_96046 Galerina marginata GALMADRAFT_96046 I 0.000
GLRG_07219 Colletotrichum graminicola GLRG_07219 I 0.000
GYMLUDRAFT_200447 Gymnopus luxurians GYMLUDRAFT_200447 I 0.000
GYMLUDRAFT_42558 Gymnopus luxurians GYMLUDRAFT_42558 I 0.000
GYMLUDRAFT_42922 Gymnopus luxurians GYMLUDRAFT_42922 I 0.000
GYMLUDRAFT_42954 Gymnopus luxurians GYMLUDRAFT_42954 I 0.000
GYMLUDRAFT_45397 Gymnopus luxurians GYMLUDRAFT_45397 I 0.000
GYMLUDRAFT_46373 Gymnopus luxurians GYMLUDRAFT_46373 I 0.000
GYMLUDRAFT_98786 Gymnopus luxurians GYMLUDRAFT_98786 I 0.000
HETIRDRAFT_20153 Heterobasidion irregulare HETIRDRAFT_20153 I 0.000
HETIRDRAFT_459989 Heterobasidion irregulare HETIRDRAFT_459989 I 0.000
HYDPIDRAFT_114430 Hydnomerulius pinastri HYDPIDRAFT_114430 I 0.000
HYDPIDRAFT_115133 Hydnomerulius pinastri HYDPIDRAFT_115133 I 0.000
J056_000139 Wallemia ichthyophaga J056_000139 I 0.000
JAAARDRAFT_188604 Jaapia argillacea JAAARDRAFT_188604 I 0.000
JAAARDRAFT_204099 Jaapia argillacea JAAARDRAFT_204099 I 0.000
JAAARDRAFT_30847 Jaapia argillacea JAAARDRAFT_30847 I 0.000
JAAARDRAFT_31102 Jaapia argillacea JAAARDRAFT_31102 I 0.000
K443DRAFT_2600 Laccaria amethystina K443DRAFT_2600 I 0.000
K443DRAFT_672096 Laccaria amethystina K443DRAFT_672096 I 0.000
K443DRAFT_673001 Laccaria amethystina K443DRAFT_673001 I 0.000
K443DRAFT_674079 Laccaria amethystina K443DRAFT_674079 I 0.000
K443DRAFT_676241 Laccaria amethystina K443DRAFT_676241 I 0.000
K443DRAFT_86263 Laccaria amethystina K443DRAFT_86263 I 0.000
L804_05560 Cryptococcus gattii L804_05560 I 0.000
L804_06456 Cryptococcus gattii L804_06456 I 0.000
LACBIDRAFT_302761 Laccaria bicolor LACBIDRAFT_302761 I 0.000
LACBIDRAFT_302769 Laccaria bicolor LACBIDRAFT_302769 I 0.000
LACBIDRAFT_308722 Laccaria bicolor LACBIDRAFT_308722 I 0.000
LACBIDRAFT_317135 Laccaria bicolor LACBIDRAFT_317135 I 0.000
M378DRAFT_124945 Amanita muscaria M378DRAFT_124945 I 0.000
M378DRAFT_15001 Amanita muscaria M378DRAFT_15001 I 0.000
M378DRAFT_15003 Amanita muscaria M378DRAFT_15003 I 0.000
M378DRAFT_161851 Amanita muscaria M378DRAFT_161851 I 0.000
M404DRAFT_489064 Pisolithus tinctorius M404DRAFT_489064 I 0.000
M404DRAFT_997952 Pisolithus tinctorius M404DRAFT_997952 I 0.000
M407DRAFT_24843 Tulasnella calospora M407DRAFT_24843 I 0.000
M408DRAFT_88636 Serendipita vermifera M408DRAFT_88636 I 0.000
M413DRAFT_310281 Hebeloma cylindrosporum M413DRAFT_310281 I 0.000
M413DRAFT_32150 Hebeloma cylindrosporum M413DRAFT_32150 I 0.000
M413DRAFT_442869 Hebeloma cylindrosporum M413DRAFT_442869 I 0.000
M413DRAFT_445487 Hebeloma cylindrosporum M413DRAFT_445487 I 0.000
M413DRAFT_446984 Hebeloma cylindrosporum M413DRAFT_446984 I 0.000
M422DRAFT_250500 Sphaerobolus stellatus M422DRAFT_250500 I 0.000
M422DRAFT_36818 Sphaerobolus stellatus M422DRAFT_36818 I 0.000
M422DRAFT_38534 Sphaerobolus stellatus M422DRAFT_38534 I 0.000
MELLADRAFT_104422 Melampsora laricipopulina MELLADRAFT_104422 I 0.000
Moror_11062 Moniliophthora roreri Moror_11062 I 0.000
Moror_1106 Moniliophthora roreri Moror_1106 I 0.000
Moror_17436 Moniliophthora roreri Moror_17436 I 0.000
Moror_17515 Moniliophthora roreri Moror_17515 I 0.000
Moror_4700 Moniliophthora roreri Moror_4700 I 0.000
PAXINDRAFT_170130 Paxillus involutus PAXINDRAFT_170130 I 0.000
PAXRUDRAFT_138309 Paxillus rubicundulus PAXRUDRAFT_138309 I 0.000
PAXRUDRAFT_783296 Paxillus rubicundulus PAXRUDRAFT_783296 I 0.000
PAXRUDRAFT_825324 Paxillus rubicundulus PAXRUDRAFT_825324 I 0.000
PGTG_18397 Puccinia graminis PGTG_18397 I 0.000
PHACADRAFT_263665 Phanerochaete carnosa PHACADRAFT_263665 I 0.000
PHACADRAFT_263672 Phanerochaete carnosa PHACADRAFT_263672 I 0.000
PHLGIDRAFT_108161 Phlebiopsis gigantea PHLGIDRAFT_108161 I 0.000
PHLGIDRAFT_108170 Phlebiopsis gigantea PHLGIDRAFT_108170 I 0.000
PHLGIDRAFT_110627 Phlebiopsis gigantea PHLGIDRAFT_110627 I 0.000
PHLGIDRAFT_32525 Phlebiopsis gigantea PHLGIDRAFT_32525 I 0.000
PHLGIDRAFT_391785 Phlebiopsis gigantea PHLGIDRAFT_391785 I 0.000
PIIN_01713 Piriformospora indica PIIN_01713 I 0.000
PILCRDRAFT_827976 Piloderma croceum PILCRDRAFT_827976 I 0.000
PISMIDRAFT_108067 Pisolithus microcarpus PISMIDRAFT_108067 I 0.000
PISMIDRAFT_240886 Pisolithus microcarpus PISMIDRAFT_240886 I 0.000
PISMIDRAFT_29414 Pisolithus microcarpus PISMIDRAFT_29414 I 0.000
PLEOSDRAFT_1097493 Pleurotus ostreatus PLEOSDRAFT_1097493 I 0.000
PLEOSDRAFT_1111862 Pleurotus ostreatus PLEOSDRAFT_1111862 I 0.000
PLEOSDRAFT_1113284 Pleurotus ostreatus PLEOSDRAFT_1113284 I 0.000
PLEOSDRAFT_30253 Pleurotus ostreatus PLEOSDRAFT_30253 I 0.000
PLICRDRAFT_180316 Plicaturopsis crispa PLICRDRAFT_180316 I 0.000
POSPLDRAFT_19733 Postia placenta POSPLDRAFT_19733 I 0.000
RHTO_02396 Rhodosporidium toruloides RHTO_02396 I 0.000
SCHCODRAFT_111379 Schizophyllum commune SCHCODRAFT_111379 I 0.000
SCHCODRAFT_258888 Schizophyllum commune SCHCODRAFT_258888 I 0.000
SCHCODRAFT_269949 Schizophyllum commune SCHCODRAFT_269949 I 0.000
SCHCODRAFT_63410 Schizophyllum commune SCHCODRAFT_63410 I 0.000
SCHCODRAFT_64223 Schizophyllum commune SCHCODRAFT_64223 I 0.000
SCHCODRAFT_66861 Schizophyllum commune SCHCODRAFT_66861 I 0.000
SCLCIDRAFT_106216 Scleroderma citrinum SCLCIDRAFT_106216 I 0.000
SCLCIDRAFT_13431 Scleroderma citrinum SCLCIDRAFT_13431 I 0.000
SCLCIDRAFT_21582 Scleroderma citrinum SCLCIDRAFT_21582 I 0.000
SERLA73DRAFT_110825 Serpula lacrymans SERLA73DRAFT_110825 I 0.000
SERLA73DRAFT_79751 Serpula lacrymans SERLA73DRAFT_79751 I 0.000
V565_059490 Rhizoctonia solani V565_059490 I 0.000
WALSEDRAFT_59710 Wallemia sebi WALSEDRAFT_59710 I 0.000
fgenesh1_pg.C_scaffold_3000367 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000367 I 0.000
estExt_Genewise1Plus.C_60615 Heterobasidion annosum estExt_Genewise1Plus.C_60615 I 0.000
EuGene6000619 Heterobasidion annosum EuGene6000619 I 0.000
Genemark.194_g Heterobasidion annosum Genemark.194_g I 0.000
gw1.6.816.1 Heterobasidion annosum gw1.6.816.1 I 0.000