CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000021273
(
Oreochromis niloticus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSONIG00000021273
T036303_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.870
0.882
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.870
0.882
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.870
0.882
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.870
0.882
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.870
0.882
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.870
0.882
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.870
0.882
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.870
0.882
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000026575
bHLH
90
141
RRIEANARERHRMHGLNNALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWVL
Links
Other
bHLH
family TFs
Other
Oreochromis niloticus
TFs
213 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_02975
Arthroderma otae
MCYG_02975
N
PMAA_093440
Penicillium marneffei
PMAA_093440
N
Pc22g24500
Penicillium chrysogenum
Pc22g24500
N
e_gw1.00169.1.1
Aspergillus carbonarius
e_gw1.00169.1.1
N
W97_05488
Coniosporium apollinis
W97_05488
N
UREG_06021
Uncinocarpus reesii
UREG_06021
N
U727_00431231441
Penicillium solitum
U727_00431231441
N
TSTA_047890
Talaromyces stipitatus
TSTA_047890
N
TEQG_06658
Trichophyton equinum
TEQG_06658
N
PVAR5_7535
Byssochlamys spectabilis
PVAR5_7535
N
PITC_054260
Penicillium italicum
PITC_054260
N
PDE_03331
Penicillium oxalicum
PDE_03331
N
PCH_Pc22g24500
Penicillium rubens
PCH_Pc22g24500
N
PABG_04267
Paracoccidioides brasiliensis
PABG_04267
N
PAAG_04477
Paracoccidioides sp lutzii
PAAG_04477
N
CIMG_09999
Coccidioides immitis
CIMG_09999
N
HCBG_02942
Histoplasma capsulatum
HCBG_02942
N
H105_08842
Trichophyton soudanense
H105_08842
N
H102_08817
Trichophyton rubrum
H102_08817
N
EURHEDRAFT_460941
Aspergillus ruber
EURHEDRAFT_460941
N
CPC735_011650
Coccidioides posadasii
CPC735_011650
N
NFIA_048150
Neosartorya fischeri
CADNFIAG00004366
N
ATEG_07265
Aspergillus terreus
CADATEAG00003627
N
ANIA_08666
Aspergillus nidulans
CADANIAG00006379
N
CADANGAG00010337
Aspergillus niger
CADANGAG00010337
N
AFUA_6G01960
Aspergillus fumigatus
CADAFUAG00000662
N
ACLA_098580
Aspergillus clavatus
CADACLAG00009113
N
BDDG_09840
Blastomyces dermatitidis
BDDG_09840
N
MCYG_02975
Microsporum canis
MCYG_02975
N