MSC (Procavia capensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPCAG00000004330 T036599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.914 1.000
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.914 1.000
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.914 1.000
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.914 1.000
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.914 1.000
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.914 1.000
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.914 1.000
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.914 0.981
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.914 0.981
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.914 0.981
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.914 0.981
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000004018 bHLH 112 164

Links

Other bHLH family TFs
Other Procavia capensis TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TFAP4 Homo sapiens ENSG00000090447 D
Tfap4 Mus musculus ENSMUSG00000005718 D
crp Drosophila melanogaster FBgn0001994 D
ACYPI003006 Acyrthosiphon pisum ACYPI003006 I
AGAP010201 Anopheles gambiae AGAP010201 I
BGIBMGA010353 Bombyx mori BGIBMGA010353 I
CapteG45346 Capitella teleta CapteG45346 I
CGI_10026909 Crassostrea gigas CGI_10026909 I
TFAP4 Anolis carolinensis ENSACAG00000016352 I
ENSAMEG00000002016 Ailuropoda melanoleuca ENSAMEG00000002016 I
ENSAPLG00000013446 Anas platyrhynchos ENSAPLG00000013446 I
TFAP4 Bos taurus ENSBTAG00000033174 I
TFAP4 Canis familiaris ENSCAFG00000019231 I
ENSCING00000014406 Ciona intestinalis ENSCING00000014406 I
TFAP4 Callithrix jacchus ENSCJAG00000019756 I
TFAP4 Cavia porcellus ENSCPOG00000004174 I
ENSCSAG00000009620 Chlorocebus sabaeus ENSCSAG00000009620 I
ENSCSAVG00000000333 Ciona savignyi ENSCSAVG00000000333 I
tfap4 Danio rerio ENSDARG00000103923 I
TFAP4 Dasypus novemcinctus ENSDNOG00000039193 I
Tfap4 Dipodomys ordii ENSDORG00000004656 I
TFAP4 Equus caballus ENSECAG00000022311 I
TFAP4 Erinaceus europaeus ENSEEUG00000006004 I
TFAP4 Echinops telfairi ENSETEG00000008634 I
ENSFALG00000004331 Ficedula albicollis ENSFALG00000004331 I
TFAP4 Felis catus ENSFCAG00000011227 I
tfap4 Gasterosteus aculeatus ENSGACG00000011329 I
tfap4 Gasterosteus aculeatus ENSGACG00000018768 I
ENSGALG00000027823 Gallus gallus ENSGALG00000027823 I
TFAP4 Gorilla gorilla ENSGGOG00000000451 I
ENSGMOG00000014930 Gadus morhua ENSGMOG00000014930 I
ENSGMOG00000015232 Gadus morhua ENSGMOG00000015232 I
ENSLACG00000000328 Latimeria chalumnae ENSLACG00000000328 I
TFAP4 Loxodonta africana ENSLAFG00000022341 I
ENSLOCG00000002626 Lepisosteus oculatus ENSLOCG00000002626 I
ENSMEUG00000000888 Macropus eugenii ENSMEUG00000000888 I
TFAP4 Meleagris gallopavo ENSMGAG00000009411 I
TFAP4 Myotis lucifugus ENSMLUG00000005725 I
TFAP4 Monodelphis domestica ENSMODG00000016377 I
ENSMPUG00000015023 Mustela putorius furo ENSMPUG00000015023 I
ENSNLEG00000009797 Nomascus leucogenys ENSNLEG00000009797 I
TFAP4 Ornithorhynchus anatinus ENSOANG00000019858 I
ENSOARG00000003120 Ovis aries ENSOARG00000003120 I
TFAP4 Oryctolagus cuniculus ENSOCUG00000024550 I
TFAP4 Otolemur garnettii ENSOGAG00000008955 I
ENSONIG00000005196 Oreochromis niloticus ENSONIG00000005196 I
ENSONIG00000016338 Oreochromis niloticus ENSONIG00000016338 I
ENSOPRG00000001061 Ochotona princeps ENSOPRG00000001061 I
tfap4 Oryzias latipes ENSORLG00000008286 I
tfap4 Oryzias latipes ENSORLG00000015050 I
ENSPANG00000010499 Papio anubis ENSPANG00000010499 I
TFAP4 Procavia capensis ENSPCAG00000011134 I
ENSPFOG00000000836 Poecilia formosa ENSPFOG00000000836 I
ENSPFOG00000011355 Poecilia formosa ENSPFOG00000011355 I
ENSPPYG00000007054 Pongo abelii ENSPPYG00000007054 I
ENSPSIG00000009002 Pelodiscus sinensis ENSPSIG00000009002 I
TFAP4 Pan troglodytes ENSPTRG00000007713 I
ENSPVAG00000005418 Pteropus vampyrus ENSPVAG00000005418 I
Tfap4 Rattus norvegicus ENSRNOG00000005227 I
ENSSHAG00000011487 Sarcophilus harrisii ENSSHAG00000011487 I
TFAP4 Tupaia belangeri ENSTBEG00000014089 I
tfap4 Tetraodon nigroviridis ENSTNIG00000002015 I
tfap4 Tetraodon nigroviridis ENSTNIG00000009740 I
tfap4 Tetraodon nigroviridis ENSTNIG00000014095 I
tfap4 Takifugu rubripes ENSTRUG00000006111 I
tfap4 Takifugu rubripes ENSTRUG00000013344 I
TFAP4 Tursiops truncatus ENSTTRG00000002710 I
TFAP4 Vicugna pacos ENSVPAG00000008001 I
ENSXMAG00000004632 Xiphophorus maculatus ENSXMAG00000004632 I
ENSXMAG00000011968 Xiphophorus maculatus ENSXMAG00000011968 I
GA20511 Drosophila pseudoobscura FBgn0080505 I
GF21721 Drosophila ananassae FBgn0098721 I
GG24179 Drosophila erecta FBgn0116312 I
GH10096 Drosophila grimshawi FBgn0117577 I
GI14377 Drosophila mojavensis FBgn0137129 I
GL14101 Drosophila persimilis FBgn0151706 I
GM17917 Drosophila sechellia FBgn0172824 I
GD21926 Drosophila simulans FBgn0193342 I
GJ16254 Drosophila virilis FBgn0203439 I
GK24289 Drosophila willistoni FBgn0226250 I
GE19372 Drosophila yakuba FBgn0236717 I
GB48999 Apis mellifera GB48999 I
HMEL008759 Heliconius melpomene HMEL008759 I
KGM_15765 Danaus plexippus KGM_15765 I
L798_07621 Zootermopsis nevadensis L798_07621 I
SPU_003179 Strongylocentrotus purpuratus SPU_003179 I
tetur30g00270 Tetranychus urticae tetur30g00270 I
Aan_R014038 Calypte anna Aan_R014038 I
Afo_R007145 Aptenodytes forsteri Afo_R007145 I
Alligator_sinensis_CCG004455.1 Alligator sinensis Alligator_sinensis_CCG004455.1 I
Cmyd_10017689 Chelonia mydas Cmyd_10017689 I
ENSP00000204517-D1 Bos grunniens ENSP00000204517-D1 I
ENSP00000204517 Macaca fascicularis ENSP00000204517 I
Myotis_brandtii_TFAP4_10028039 Myotis brandtii Myotis_brandtii_TFAP4_10028039 I
Ogr05167 Ophisaurus gracilis Ogr05167 I
Pvit_18996 Pogona vitticeps Pvit_18996 I
estExt_fgenesh2_pg.C_3260041 Branchiostoma floridae estExt_fgenesh2_pg.C_3260041 I
fgenesh2_pg.scaffold_326000054 Branchiostoma floridae fgenesh2_pg.scaffold_326000054 I
Sakowv30040946m.g Saccoglossus kowalevskii Sakowv30040946m.g I
tfap4 Xenopus tropicalis XB-GENE-999265 I
LLOJ009485 Lutzomyia longipalpis LLOJ009485 I
MDOA012071 Musca domestica MDOA012071 I
TCLT_0000678201 Thelazia callipaeda TCLT_0000678201 I