CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ARNT *(Procavia capensis)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSPCAG00000008485	T036622_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Arnt M01719_2.00	Mus musculus	NNKCACGTGMNN	NNKCACGTGMNN	PBM Weirauch et al.(2014) pTH5111	0.914	1.000
ARNT M08732_2.00	Homo sapiens	NKRCGTGMN	NKCACGYMN	Misc Kulakovskiy et al.(2013) ARNT_HUMAN.H11MO.0.B	0.914	1.000
ARNT M09459_2.00	Homo sapiens	KCACGTNN	NNACGTGM	Misc Heinz et al.(2010) T47D-HIF1b_GSE59937	0.914	1.000
ARNT M09863_2.00	Homo sapiens	NVNNNCACGTGNHHHN	NDDDNCACGTGNNNBN	Transfac Matys et al.(2006) V$ARNT_01	0.914	1.000
ARNT M09864_2.00	Homo sapiens	VVNNNRKCACGTGMYNNNBB	VVNNNRKCACGTGMYNNNBB	Transfac Matys et al.(2006) V$ARNT_02	0.914	1.000
ARNT M09865_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ARNT_Q6_01	0.914	1.000
ARNT M09866_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ARNT_Q6	0.914	1.000
tgo M06005_2.00	Drosophila melanogaster	RDDTCGTGAYY	RRTCACGAHHY	B1H Zhu et al.(2011) dys_tgo_SANGER_5_FBgn0015014	0.914	0.926
tgo M06006_2.00	Drosophila melanogaster	SDTTGCGTGAC	GTCACGCAAHS	B1H Zhu et al.(2011) ss_tgo_SANGER_10_FBgn0015014	0.914	0.926
tgo M06007_2.00	Drosophila melanogaster	KCACGTGAC	GTCACGTGM	B1H Zhu et al.(2011) tgo_cyc_SANGER_5_FBgn0015014	0.914	0.926
tgo M06008_2.00	Drosophila melanogaster	RTACGTGAC	GTCACGTAY	B1H Zhu et al.(2011) tgo_sima_SANGER_5_FBgn0015014	0.914	0.926
tgo M06009_2.00	Drosophila melanogaster	VWACGTGACY	RGTCACGTWB	B1H Zhu et al.(2011) tgo_sim_SANGER_5_FBgn0015014	0.914	0.926
tgo M06010_2.00	Drosophila melanogaster	TGCGTGAC	GTCACGCA	B1H Zhu et al.(2011) tgo_ss_SANGER_5_FBgn0015014	0.914	0.926
tgo M06011_2.00	Drosophila melanogaster	RCACGTGAC	GTCACGTGY	B1H Zhu et al.(2011) tgo_tai_SANGER_5_FBgn0015014	0.914	0.926
tgo M06012_2.00	Drosophila melanogaster	VTACGTGACB	VGTCACGTAB	B1H Zhu et al.(2011) tgo_trh_SANGER_5_FBgn0015014	0.914	0.926
Arnt2 M01720_2.00	Mus musculus	NCAYRTGMNN	NNKCAYRTGN	PBM Weirauch et al.(2014) pTH5159	0.862	0.944
ARNT2 M04170_2.00	Homo sapiens	RDCACGTGMN	NKCACGTGHY	SELEX Yin et al.(2017) ARNT2_eDBD_HT-SELEX	0.862	0.944
Arnt2 M09888_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ARNT2_01	0.862	0.944
For this family, TFs with SR scores > 0.838* will likely have a similar motif*