CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000004604
(
Poecilia formosa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSPFOG00000004604
T036665_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Olig3
M01745_2.00
Mus musculus
NWAHHATANNN
NNNTATDDTWN
PBM
Weirauch et al.(2014)
pTH5164
0.914
1.000
OLIG3
M02798_2.00
Homo sapiens
AMCATATGBY
RVCATATGKT
SELEX
Jolma et al.(2013)
OLIG3_1
0.914
1.000
OLIG3
M04175_2.00
Homo sapiens
RMCATATGSY
RSCATATGKY
SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX
0.914
1.000
OLIG3
M04171_2.00
Homo sapiens
RMCATATGSY
RSCATATGKY
SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1
0.914
1.000
OLIG3
M04172_2.00
Homo sapiens
AACAKMTGBT
AVCAKMTGTT
SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2
0.914
1.000
OLIG3
M04176_2.00
Homo sapiens
RMCATATGGY
RCCATATGKY
SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX
0.914
1.000
OLIG3
M04173_2.00
Homo sapiens
RMCATATGSY
RSCATATGKY
SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1
0.914
1.000
OLIG3
M04174_2.00
Homo sapiens
VACAKMTGKY
RMCAKMTGTB
SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2
0.914
1.000
OLIG2
M02812_2.00
Homo sapiens
AMCATATGBY
RVCATATGKT
SELEX
Jolma et al.(2013)
OLIG2_1
0.894
0.964
OLIG2
M02813_2.00
Homo sapiens
AMCATATGBY
RVCATATGKT
SELEX
Jolma et al.(2013)
OLIG2_2
0.894
0.964
OLIG2
M04223_2.00
Homo sapiens
AACAKMTGTB
VACAKMTGTT
SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1
0.894
0.964
OLIG2
M04224_2.00
Homo sapiens
AMCATATGKY
RMCATATGKT
SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2
0.894
0.964
OLIG2
M08742_2.00
Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN
Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B
0.894
0.964
Olig2
M08771_2.00
Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN
Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A
0.894
0.964
Olig2
M09477_2.00
Mus musculus
RVCAKMTGKH
DMCAKMTGBY
Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882
0.894
0.964
OLIG2
M04225_2.00
Homo sapiens
AACAKMTGKB
VMCAKMTGTT
SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1
0.894
0.964
OLIG2
M04226_2.00
Homo sapiens
AMCATATGKT
AMCATATGKT
SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2
0.894
0.964
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000004488
bHLH
66
120
LRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLT
Links
Other
bHLH
family TFs
Other
Poecilia formosa
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PDE_08587
Penicillium oxalicum
PDE_08587
N
Pc22g04590
Penicillium chrysogenum
Pc22g04590
N
fgenesh1_pm.00009_#_428
Aspergillus carbonarius
fgenesh1_pm.00009_#_428
N
e_gw1.1.2115.1
Mycosphaerella graminicola
e_gw1.1.2115.1
N
e_gw1.1.1360.1
Mycosphaerella fijiensis
e_gw1.1.1360.1
N
TSTA_076880
Talaromyces stipitatus
TSTA_076880
N
SEPMUDRAFT_146528
Sphaerulina musiva
SEPMUDRAFT_146528
N
PMAA_043210
Talaromyces marneffei
PMAA_043210
N
PEX1_056780
Penicillium expansum
PEX1_056780
N
PDIP_43200
Penicillium digitatum
PDIP_43200
N
BDDG_04697
Blastomyces dermatitidis
BDDG_04697
N
PCH_Pc22g04590
Penicillium rubens
PCH_Pc22g04590
N
PABG_00369
Paracoccidioides brasiliensis
PABG_00369
N
Mycgr3G31528
Zymoseptoria tritici
Mycgr3G31528
N
DOTSEDRAFT_68893
Dothistroma septosporum
DOTSEDRAFT_68893
N
ATEG_03141
Aspergillus terreus
CADATEAG00010078
N
CADAORAG00003802
Aspergillus oryzae
CADAORAG00003802
N
CADANGAG00000803
Aspergillus niger
CADANGAG00000803
N
AFUA_4G12560
Aspergillus fumigatus
CADAFUAG00007876
N
ACLA_051560
Aspergillus clavatus
CADACLAG00004596
N