NEUROD1 (Pan troglodytes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPTRG00000012702 T037039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.914 1.000
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.914 1.000
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.914 1.000
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.914 1.000
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.914 1.000
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.914 1.000
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.914 1.000
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.914 1.000
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.879 0.962
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.879 0.962
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.879 0.962
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.879 0.962
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000021721 bHLH 102 154

Links

Other bHLH family TFs
Other Pan troglodytes TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PISMIDRAFT_518962 Pisolithus microcarpus PISMIDRAFT_518962 N
M408DRAFT_331100 Serendipita vermifera M408DRAFT_331100 N
M413DRAFT_317271 Hebeloma cylindrosporum M413DRAFT_317271 N
Moror_3334 Moniliophthora roreri Moror_3334 N
PAXRUDRAFT_310605 Paxillus rubicundulus PAXRUDRAFT_310605 N
PHACADRAFT_250026 Phanerochaete carnosa PHACADRAFT_250026 N
PHLGIDRAFT_14903 Phlebiopsis gigantea PHLGIDRAFT_14903 N
PIIN_04557 Piriformospora indica PIIN_04557 N
PILCRDRAFT_98744 Piloderma croceum PILCRDRAFT_98744 N
M408DRAFT_112963 Serendipita vermifera M408DRAFT_112963 N
PLEOSDRAFT_1112373 Pleurotus ostreatus PLEOSDRAFT_1112373 N
SCHCODRAFT_255004 Schizophyllum commune SCHCODRAFT_255004 N
SCLCIDRAFT_1214056 Scleroderma citrinum SCLCIDRAFT_1214056 N
SERLA73DRAFT_164436 Serpula lacrymans SERLA73DRAFT_164436 N
V565_005940 Rhizoctonia solani V565_005940 N
fgenesh1_pg.C_scaffold_2000219 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000219 N
estExt_fgenesh2_pg.C_40332 Heterobasidion annosum estExt_fgenesh2_pg.C_40332 N
fgeneshTM_pg.3_#_605 Tremella mesenterica fgeneshTM_pg.3_#_605 N
GYMLUDRAFT_179245 Gymnopus luxurians GYMLUDRAFT_179245 N
BN946_scf185015.g136 Trametes cinnabarina BN946_scf185015.g136 N
BOTBODRAFT_26540 Botryobasidium botryosum BOTBODRAFT_26540 N
CC1G_01461 Coprinopsis cinerea CC1G_01461 N
CY34DRAFT_22781 Suillus luteus CY34DRAFT_22781 N
DICSQDRAFT_58350 Dichomitus squalens DICSQDRAFT_58350 N
FOMPIDRAFT_1125748 Fomitopsis pinicola FOMPIDRAFT_1125748 N
GALMADRAFT_133470 Galerina marginata GALMADRAFT_133470 N
GLOTRDRAFT_135965 Gloeophyllum trabeum GLOTRDRAFT_135965 N
AGABI2DRAFT_195724 Agaricus bisporus AGABI2DRAFT_195724 N
HETIRDRAFT_449677 Heterobasidion irregulare HETIRDRAFT_449677 N
JAAARDRAFT_52170 Jaapia argillacea JAAARDRAFT_52170 N
K443DRAFT_131560 Laccaria amethystina K443DRAFT_131560 N
LACBIDRAFT_292733 Laccaria bicolor LACBIDRAFT_292733 N
M378DRAFT_175598 Amanita muscaria M378DRAFT_175598 N
M404DRAFT_678760 Pisolithus tinctorius M404DRAFT_678760 N
M407DRAFT_227259 Tulasnella calospora M407DRAFT_227259 N