CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Olig1
(
Rattus norvegicus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSRNOG00000028648
T037238_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OLIG1
M02806_2.00
Homo sapiens
AMCATATGBT
AVCATATGKT
SELEX
Jolma et al.(2013)
OLIG1_1
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000002827
bHLH
80
139
LRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARNYILLLG
Links
Other
bHLH
family TFs
Other
Rattus norvegicus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si024235m.g
Setaria italica
Si024235m.g
N
Pavir.Ca02695
Panicum virgatum
Pavir.Ca02695
N
Pavir.Cb00316
Panicum virgatum
Pavir.Cb00316
N