CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000013034
(
Sarcophilus harrisii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSSHAG00000013034
T037347_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FERD3L
M04140_2.00
Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1
0.890
0.962
FERD3L
M04141_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2
0.890
0.962
FERD3L
M04142_2.00
Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1
0.890
0.962
FERD3L
M04143_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2
0.890
0.962
Fer3
M05993_2.00
Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC
B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937
0.866
0.846
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000015286
bHLH
101
153
QRQAANIRERKRMLNLNEAFDQLRKKVPTFAYEKRLSRIETLRLAIVYISFMT
Links
Other
bHLH
family TFs
Other
Sarcophilus harrisii
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1Q1_01456
Trichosporon asahii
A1Q1_01456
N
AGABI2DRAFT_180216
Agaricus bisporus
AGABI2DRAFT_180216
N
FOMPIDRAFT_39384
Fomitopsis pinicola
FOMPIDRAFT_39384
N
M422DRAFT_127323
Sphaerobolus stellatus
M422DRAFT_127323
N
Moror_5215
Moniliophthora roreri
Moror_5215
N
PDIP_53990
Penicillium digitatum
PDIP_53990
N
PHLGIDRAFT_73850
Phlebiopsis gigantea
PHLGIDRAFT_73850
N
PILCRDRAFT_36344
Piloderma croceum
PILCRDRAFT_36344
N
PLEOSDRAFT_18759
Pleurotus ostreatus
PLEOSDRAFT_18759
N
SERLA73DRAFT_17521
Serpula lacrymans
SERLA73DRAFT_17521
N
UV8b_7728
Ustilaginoidea virens
UV8b_7728
N
gw1.1.808.1
Phycomyces blakesleeanus
gw1.1.808.1
N
gw1.4.1763.1
Mucor circinelloides
gw1.4.1763.1
N
gw1.6.1266.1
Mucor circinelloides
gw1.6.1266.1
N
gwh2.9.410.1
Phanerochaete chrysosporium
gwh2.9.410.1
N
e_gw1.5.528.1
Heterobasidion annosum
e_gw1.5.528.1
N