MSC (Sus scrofa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSSCG00000006187 T037403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.914 1.000
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.914 1.000
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.914 1.000
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.914 1.000
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.914 1.000
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.914 1.000
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.914 1.000
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.914 0.981
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.914 0.981
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.914 0.981
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.914 0.981
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000006598 bHLH 103 155

Links

Other bHLH family TFs
Other Sus scrofa TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I
ENSPMAG00000005876 Petromyzon marinus ENSPMAG00000005876 I
grhl1 Danio rerio ENSDARG00000061391 I
GRHL3 Taeniopygia guttata ENSTGUG00000001153 N
GRHL3 Tursiops truncatus ENSTTRG00000016160 N
ENSSTOG00000023529 Ictidomys tridecemlineatus ENSSTOG00000023529 N
GRHL3 Sus scrofa ENSSSCG00000003539 N
ENSSHAG00000008311 Sarcophilus harrisii ENSSHAG00000008311 N
Grhl3 Rattus norvegicus ENSRNOG00000029427 N
GRHL3 Pteropus vampyrus ENSPVAG00000005827 N
GRHL3 Pan troglodytes ENSPTRG00000000344 N
ENSPSIG00000016215 Pelodiscus sinensis ENSPSIG00000016215 N
ENSPPYG00000001721 Pongo abelii ENSPPYG00000001721 N
GRHL3 Procavia capensis ENSPCAG00000011355 N
ENSPANG00000024748 Papio anubis ENSPANG00000024748 N
GRHL3 Ochotona princeps ENSOPRG00000003928 N
ENSONIG00000003513 Oreochromis niloticus ENSONIG00000003513 N
GRHL3 Oryctolagus cuniculus ENSOCUG00000013357 N
Aan_R005902 Calypte anna Aan_R005902 N
Afo_R008962 Aptenodytes forsteri Afo_R008962 N
Alligator_sinensis_CCG010998.1 Alligator sinensis Alligator_sinensis_CCG010998.1 N
Brh_R012570 Buceros rhinoceros Brh_R012570 N
Cmyd_10004499 Chelonia mydas Cmyd_10004499 N
ENSBTAP00000026370-D1 Bos grunniens ENSBTAP00000026370-D1 N
ENSP00000288955 Macaca fascicularis ENSP00000288955 N
Gfo_R011603 Geospiza fortis Gfo_R011603 N
Myotis_brandtii_Grhl3_10029711 Myotis brandtii Myotis_brandtii_Grhl3_10029711 N
Pvit_10773 Pogona vitticeps Pvit_10773 N
Tal_R005479 Tyto alba Tal_R005479 N
grhl3.S Xenopus laevis XB-GENE-17342846 N
grhl3 Xenopus tropicalis XB-GENE-919797 N
grhl3.L Xenopus laevis XB-GENE-919808 N
GRHL3 Gorilla gorilla ENSGGOG00000001792 N
ENSAMEG00000009982 Ailuropoda melanoleuca ENSAMEG00000009982 N
ENSAPLG00000003161 Anas platyrhynchos ENSAPLG00000003161 N
GRHL3 Canis familiaris ENSCAFG00000012994 N
GRHL3 Choloepus hoffmanni ENSCHOG00000000305 N
GRHL3 Callithrix jacchus ENSCJAG00000020858 N
GRHL3 Cavia porcellus ENSCPOG00000008841 N
ENSCSAG00000000939 Chlorocebus sabaeus ENSCSAG00000000939 N
GRHL3 Dasypus novemcinctus ENSDNOG00000013939 N
Grhl3 Dipodomys ordii ENSDORG00000001381 N
GRHL3 Equus caballus ENSECAG00000009866 N
GRHL3 Echinops telfairi ENSETEG00000001594 N
ENSFALG00000000490 Ficedula albicollis ENSFALG00000000490 N
GRHL3 Felis catus ENSFCAG00000019048 N
GRHL3 Homo sapiens ENSG00000158055 N
GRHL3 Gallus gallus ENSGALG00000004249 N
GRHL3 Otolemur garnettii ENSOGAG00000011027 N
GRHL3 Loxodonta africana ENSLAFG00000001618 N
ENSMEUG00000004978 Macropus eugenii ENSMEUG00000004978 N
GRHL3 Meleagris gallopavo ENSMGAG00000005903 N
GRHL3 Microcebus murinus ENSMICG00000000542 N
ENSMLUG00000012056 Myotis lucifugus ENSMLUG00000012056 N
ENSMLUG00000027396 Myotis lucifugus ENSMLUG00000027396 N
GRHL3 Macaca mulatta ENSMMUG00000004463 N
GRHL3 Monodelphis domestica ENSMODG00000013064 N
ENSMPUG00000015840 Mustela putorius furo ENSMPUG00000015840 N
Grhl3 Mus musculus ENSMUSG00000037188 N
ENSNLEG00000008898 Nomascus leucogenys ENSNLEG00000008898 N
GRHL3 Ornithorhynchus anatinus ENSOANG00000002207 N
ENSOARG00000006636 Ovis aries ENSOARG00000006636 N
GRHL3 Anolis carolinensis ENSACAG00000017262 N