arntl2 (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000007832 T037857_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.839 0.774
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.839 0.774
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.839 0.774
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.839 0.774
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.839 0.774
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.839 0.774
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.839 0.774
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.839 0.774
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.839 0.774
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000019468 bHLH 93 145
ENSTRUP00000019469 bHLH 103 155
ENSTRUP00000019470 bHLH 53 105
ENSTRUP00000019471 bHLH 33 85
ENSTRUP00000019472 bHLH 1 53

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G46210 Brachypodium distachyon BRADI3G46210 N 0.000
GRMZM2G392168 Zea mays GRMZM2G392168 N 0.000
MLOC_58439 Hordeum vulgare MLOC_58439 N 0.000
Sb06g017920 Sorghum bicolor Sb06g017920 N 0.000
Si010246m.g Setaria italica Si010246m.g N 0.000
Traes_6AL_7A4395C60 Triticum aestivum Traes_6AL_7A4395C60 N 0.000
Traes_6DL_C27CEED76 Triticum aestivum Traes_6DL_C27CEED76 N 0.000
Pavir.J27535 Panicum virgatum Pavir.J27535 N 0.000