CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

neurod2 *(Takifugu rubripes)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSTRUG00000012238	T037886_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NEUROD2 M02795_2.00	Homo sapiens	RVCATATGKY	RMCATATGBY	SELEX Jolma et al.(2013) NEUROD2_1	0.870	0.865
NEUROD2 M04160_2.00	Homo sapiens	RVCATATGKY	RMCATATGBY	SELEX Yin et al.(2017) NEUROD2_FL_HT-SELEX	0.870	0.865
NEUROD2 M08737_2.00	Homo sapiens	RRCAGMTGG	CCAKCTGYY	Misc Kulakovskiy et al.(2013) NDF2_HUMAN.H11MO.0.B	0.870	0.865
Neurod2 M08770_2.00	Mus musculus	RVCAGATGGB	VCCATCTGBY	Misc Kulakovskiy et al.(2013) NDF2_MOUSE.H11MO.0.A	0.870	0.865
NEUROD2 M04161_2.00	Homo sapiens	RMCATATGBY	RVCATATGKY	SELEX Yin et al.(2017) NEUROD2_FL_Methyl-HT-SELEX	0.870	0.865
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSTRUP00000030987	bHLH	105	157	RRMKANTRERIRMHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYILTLG

Links
Other bHLH family TFs
Other *Takifugu rubripes* TFs