msc (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000012425 T037889_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.886 0.962
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.886 0.962
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.886 0.962
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.886 0.962
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.886 0.962
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.886 0.962
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.886 0.962
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.886 0.962
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.886 0.962
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.886 0.962
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.886 0.942
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.886 0.942
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.886 0.942
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.886 0.942
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.886 0.942
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.886 0.942
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000031466 bHLH 73 125

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Msc Mus musculus ENSMUSG00000025930 D 0.886
MSC Homo sapiens ENSG00000178860 D 0.886
ENSSTOG00000024832 Ictidomys tridecemlineatus ENSSTOG00000024832 I 0.886
ENSONIG00000000446 Oreochromis niloticus ENSONIG00000000446 I 0.886
tcf21 Oryzias latipes ENSORLG00000016491 I 0.886
ENSPANG00000024238 Papio anubis ENSPANG00000024238 I 0.886
MSC Procavia capensis ENSPCAG00000004330 I 0.886
ENSPFOG00000010821 Poecilia formosa ENSPFOG00000010821 I 0.886
ENSPPYG00000018665 Pongo abelii ENSPPYG00000018665 I 0.886
ENSPSIG00000018135 Pelodiscus sinensis ENSPSIG00000018135 I 0.000
MSC Pan troglodytes ENSPTRG00000020339 I 0.886
Msc Rattus norvegicus ENSRNOG00000007540 I 0.886
ENSSHAG00000002801 Sarcophilus harrisii ENSSHAG00000002801 I 0.886
MSC Sus scrofa ENSSSCG00000006187 I 0.886
MSC Oryctolagus cuniculus ENSOCUG00000007208 I 0.886
MSC Tupaia belangeri ENSTBEG00000014659 I 0.886
MSC Taeniopygia guttata ENSTGUG00000011502 I 0.886
MSC Tursiops truncatus ENSTTRG00000017260 I 0.886
MSC Vicugna pacos ENSVPAG00000000378 I 0.886
ENSXMAG00000004322 Xiphophorus maculatus ENSXMAG00000004322 I 0.886
Alligator_sinensis_CCG018129.1 Alligator sinensis Alligator_sinensis_CCG018129.1 I 0.000
ENSBTAP00000044112-D1 Bos grunniens ENSBTAP00000044112-D1 I 0.886
ENSP00000321445 Macaca fascicularis ENSP00000321445 I 0.886
Ogr02938 Ophisaurus gracilis Ogr02938 I 0.886
Pvit_15024 Pogona vitticeps Pvit_15024 I 0.000
MSC Loxodonta africana ENSLAFG00000002649 I 0.886
MSC Bos taurus ENSBTAG00000005404 I 0.886
MSC Canis familiaris ENSCAFG00000007923 I 0.886
MSC Callithrix jacchus ENSCJAG00000007766 I 0.886
ENSCPOG00000004726 Cavia porcellus ENSCPOG00000004726 I 0.886
ENSCSAG00000013709 Chlorocebus sabaeus ENSCSAG00000013709 I 0.886
MSC Dasypus novemcinctus ENSDNOG00000019019 I 0.886
MSC Equus caballus ENSECAG00000008333 I 0.886
MSC Erinaceus europaeus ENSEEUG00000005021 I 0.886
ENSFALG00000008455 Ficedula albicollis ENSFALG00000008455 I 0.886
ENSGALG00000019470 Gallus gallus ENSGALG00000019470 I 0.886
MSC Gorilla gorilla ENSGGOG00000009955 I 0.886
MSC Otolemur garnettii ENSOGAG00000013827 I 0.886
ENSLOCG00000003912 Lepisosteus oculatus ENSLOCG00000003912 I 0.886
ENSMEUG00000005491 Macropus eugenii ENSMEUG00000005491 I 0.886
ENSMICG00000014144 Microcebus murinus ENSMICG00000014144 I 0.886
MSC Myotis lucifugus ENSMLUG00000008572 I 0.886
MSC Macaca mulatta ENSMMUG00000000947 I 0.886
MSC Monodelphis domestica ENSMODG00000007225 I 0.886
ENSMPUG00000010593 Mustela putorius furo ENSMPUG00000010593 I 0.886
ENSNLEG00000011452 Nomascus leucogenys ENSNLEG00000011452 I 0.886
ENSOARG00000004844 Ovis aries ENSOARG00000004844 I 0.886
ENSAMEG00000005942 Ailuropoda melanoleuca ENSAMEG00000005942 I 0.886