ENSXMAG00000014303 (Xiphophorus maculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSXMAG00000014303 T038161_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.914 1.000
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 1.000
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.914 1.000
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 1.000
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.914 1.000
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 1.000
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 1.000
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 1.000
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 1.000
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 1.000
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 1.000
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.885
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.962
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.962
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.962
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000014369 bHLH 595 648

Links

Other bHLH family TFs
Other Xiphophorus maculatus TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAC_00182 Sordaria macrospora SMAC_00182 N
MYCTH_2089183 Myceliophthora thermophila MYCTH_2089183 N
NechaG92211 Fusarium solani NechaG92211 N
NEUTE1DRAFT_125863 Neurospora tetrasperma NEUTE1DRAFT_125863 N
OIDMADRAFT_152191 Oidiodendron maius OIDMADRAFT_152191 N
PFICI_13325 Pestalotiopsis fici PFICI_13325 N
PODANS_1_15900 Podospora anserina PODANS_1_15900 N
S40285_05622 Stachybotrys chlorohalonata S40285_05622 N
S40288_07943 Stachybotrys chartarum S40288_07943 N
S40288_09581 Stachybotrys chartarum S40288_09581 N
SAPIO_CDS4869 Scedosporium apiospermum SAPIO_CDS4869 N
SBOR_4456 Sclerotinia borealis SBOR_4456 N
MGU_06147 Metarhizium guizhouense MGU_06147 N
THITE_2112671 Thielavia terrestris THITE_2112671 N
TRIATDRAFT_293894 Trichoderma atroviride TRIATDRAFT_293894 N
TRIREDRAFT_76705 Trichoderma reesei TRIREDRAFT_76705 N
UV8b_3402 Ustilaginoidea virens UV8b_3402 N
VDBG_01884 Verticillium alfalfae VDBG_01884 N
VHEMI05419 Torrubiella hemipterigena VHEMI05419 N
X797_007680 Metarhizium robertsii X797_007680 N
estExt_Genewise1Plus.C_70270 Neurospora discreta estExt_Genewise1Plus.C_70270 N
fgenesh1_pm.sca_54_chr3_4_0000024 Nectria haematococca fgenesh1_pm.sca_54_chr3_4_0000024 N
vad-6 Neurospora crassa NCU09205 N
estExt_Genewise1Plus.C_110189 Cryphonectria parasitica estExt_Genewise1Plus.C_110189 N
FFUJ_05577 Fusarium fujikuroi FFUJ_05577 N
ACRE_090530 Acremonium chrysogenum ACRE_090530 N
BBA_05678 Beauveria bassiana BBA_05678 N
BBA_09096 Beauveria bassiana BBA_09096 N
Bcin08g05570 Botrytis cinerea Bcin08g05570 N
CCM_07309 Cordyceps militaris CCM_07309 N
CFIO01_05100 Colletotrichum fioriniae CFIO01_05100 N
CGGC5_7812 Colletotrichum gloeosporioides CGGC5_7812 N
CH063_07963 Colletotrichum higginsianum CH063_07963 N
Cob_02607 Colletotrichum orbiculare Cob_02607 N
CPUR_04593 Claviceps purpurea CPUR_04593 N
CSUB01_00007 Colletotrichum sublineola CSUB01_00007 N
VDBG_01884 Verticillium albo atrum VDBG_01884 N
FGRRES_16399 Fusarium graminearum FGRRES_16399 N
FPSE_05593 Fusarium pseudograminearum FPSE_05593 N
FVEG_13110 Fusarium verticillioides FVEG_13110 N
GLRG_02657 Colletotrichum graminicola GLRG_02657 N
MAC_07722 Metarhizium acridum MAC_07722 N
MAC_08257 Metarhizium acridum MAC_08257 N
MAJ_06521 Metarhizium majus MAJ_06521 N
MAM_07708 Metarhizium album MAM_07708 N
MANI_114498 Metarhizium anisopliae MANI_114498 N
MBR_06341 Metarhizium brunneum MBR_06341 N
MGG_09002 Magnaporthe oryzae MGG_09002 N