CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GH10096
(
Drosophila grimshawi
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
FBgn0117577
T038629_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
crp
M03595_2.00
Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT
SELEX
Nitta et al.(2015)
crp_1
0.914
0.981
crp
M05937_2.00
Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB
B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994
0.914
0.981
hlh-11
M00931_2.00
Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT
PBM
Grove et al.(2009)
HLH11
0.879
0.750
Tfap4
M01717_2.00
Mus musculus
VHCABVYGB
VCRBVTGDB
PBM
Weirauch et al.(2014)
pTH5067
0.843
0.808
TFAP4
M02776_2.00
Homo sapiens
AWCAGCTGWY
RWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_1
0.843
0.808
TFAP4
M02777_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_2
0.843
0.808
TFAP4
M04066_2.00
Homo sapiens
VHCAKVTGDB
VHCABMTGDB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1
0.843
0.808
TFAP4
M04067_2.00
Homo sapiens
VWCAGCTGWB
VWCAGCTGWB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2
0.843
0.808
TFAP4
M04070_2.00
Homo sapiens
RHCAYVTGDB
VHCABRTGDY
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1
0.843
0.808
TFAP4
M04071_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2
0.843
0.808
TFAP4
M08712_2.00
Homo sapiens
VMNCAGCTGR
YCAGCTGNKB
Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A
0.843
0.808
TFAP4
M09453_2.00
Homo sapiens
NVHCAGCTGD
HCAGCTGDBN
Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738
0.843
0.808
TFAP4
M09802_2.00
Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK
Transfac
Matys et al.(2006)
V$AP4_01
0.843
0.808
TFAP4
M09803_2.00
Homo sapiens
NNSAGCTGHB
VDCAGCTSNN
Transfac
Matys et al.(2006)
V$AP4_Q5
0.843
0.808
TFAP4
M09804_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_01
0.843
0.808
TFAP4
M09805_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_02
0.843
0.808
TFAP4
M09806_2.00
Homo sapiens
NVCAGCTGHB
VDCAGCTGBN
Transfac
Matys et al.(2006)
V$AP4_Q6
0.843
0.808
TFAP4
M04068_2.00
Homo sapiens
DHCABMTGDN
NHCAKVTGDH
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1
0.843
0.808
TFAP4
M04069_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2
0.843
0.808
TFAP4
M04072_2.00
Homo sapiens
VHCABVTGDB
VHCABVTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1
0.843
0.808
TFAP4
M04073_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2
0.843
0.808
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0144002
bHLH
107
158
RREIANSNERRRMQSINAGFQSLRSLLPRHEGEKLSKAAILQQTFQYIVDLE
Links
Other
bHLH
family TFs
Other
Drosophila grimshawi
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU00445
Neurospora crassa
NCU00445
D
FGRRES_04109
Fusarium graminearum
FGRRES_04109
D
PDE_07343
Penicillium oxalicum
PDE_07343
I
SMAC_01881
Sordaria macrospora
SMAC_01881
I
SBOR_3221
Sclerotinia borealis
SBOR_3221
I
SAPIO_CDS2099
Scedosporium apiospermum
SAPIO_CDS2099
I
S40288_04720
Stachybotrys chartarum
S40288_04720
I
S40285_07798
Stachybotrys chlorohalonata
S40285_07798
I
PVAR5_1796
Byssochlamys spectabilis
PVAR5_1796
I
PTT_20177
Pyrenophora teres
PTT_20177
I
PTRG_05544
Pyrenophora triticirepentis
PTRG_05544
I
PODANS_7_6620
Podospora anserina
PODANS_7_6620
I
PMAA_034090
Talaromyces marneffei
PMAA_034090
I
PFICI_12447
Pestalotiopsis fici
PFICI_12447
I
TEQG_03363
Trichophyton equinum
TEQG_03363
I
PCH_Pc21g03530
Penicillium rubens
PCH_Pc21g03530
I
PAAG_05555
Paracoccidioides sp lutzii
PAAG_05555
I
OIDMADRAFT_157493
Oidiodendron maius
OIDMADRAFT_157493
I
NEUTE1DRAFT_146594
Neurospora tetrasperma
NEUTE1DRAFT_146594
I
NechaG100921
Fusarium solani
NechaG100921
I
MGYG_07702
Microsporum gypseum
MGYG_07702
I
MGU_00202
Metarhizium guizhouense
MGU_00202
I
MGG_15139
Magnaporthe oryzae
MGG_15139
I
MBR_02809
Metarhizium brunneum
MBR_02809
I
MBM_01117
Marssonina brunnea
MBM_01117
I
MANI_117820
Metarhizium anisopliae
MANI_117820
I
UV8b_2527
Ustilaginoidea virens
UV8b_2527
I
PMAA_034090
Penicillium marneffei
PMAA_034090
I
Pc21g03530
Penicillium chrysogenum
Pc21g03530
I
fgenesh1_pm.00710_#_124
Aspergillus carbonarius
fgenesh1_pm.00710_#_124
I
estExt_Genewise1Plus.C_12014
Cryphonectria parasitica
estExt_Genewise1Plus.C_12014
I
estExt_fgenesh2_pg.C_50201
Neurospora discreta
estExt_fgenesh2_pg.C_50201
I
estExt_fgenesh1_pg.C_sca_20_chr6_4_00369
Nectria haematococca
estExt_fgenesh1_pg.C_sca_20_chr6_4_00369
I
estExt_fgenesh1_pg.C_180221
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_180221
I
X797_000863
Metarhizium robertsii
X797_000863
I
W97_09318
Coniosporium apollinis
W97_09318
I
VHEMI07768
Torrubiella hemipterigena
VHEMI07768
I
VDBG_07828
Verticillium alfalfae
VDBG_07828
I
VDAG_09694
Verticillium dahliae
VDAG_09694
I
SPBR_05123
Sporothrix brasiliensis
SPBR_05123
I
UREG_04936
Uncinocarpus reesii
UREG_04936
I
UCRPA7_8320
Togninia minima
UCRPA7_8320
I
UCRNP2_8934
Neofusicoccum parvum
UCRNP2_8934
I
U727_0043014751
Penicillium solitum
U727_0043014751
I
TSTA_063500
Talaromyces stipitatus
TSTA_063500
I
TRIVIDRAFT_10694
Trichoderma virens
TRIVIDRAFT_10694
I
TRIREDRAFT_59067
Trichoderma reesei
TRIREDRAFT_59067
I
TRIATDRAFT_291718
Trichoderma atroviride
TRIATDRAFT_291718
I
THITE_2118415
Thielavia terrestris
THITE_2118415
I
TESG_04869
Trichophyton tonsurans
TESG_04869
I
MAM_00184
Metarhizium album
MAM_00184
I
AFUA_5G13310
Aspergillus fumigatus
CADAFUAG00006042
I
COCC4DRAFT_172749
Bipolaris maydis
COCC4DRAFT_172749
I
Cob_05363
Colletotrichum orbiculare
Cob_05363
I
CMQ_3221
Grosmannia clavigera
CMQ_3221
I
CHGG_03119
Chaetomium globosum
CHGG_03119
I
CH063_15177
Colletotrichum higginsianum
CH063_15177
I
CH063_11861
Colletotrichum higginsianum
CH063_11861
I
CFIO01_07206
Colletotrichum fioriniae
CFIO01_07206
I
CCM_09455
Cordyceps militaris
CCM_09455
I
NFIA_073730
Neosartorya fischeri
CADNFIAG00007209
I
CADAORAG00011593
Aspergillus oryzae
CADAORAG00011593
I
ANIA_06889
Aspergillus nidulans
CADANIAG00007690
I
CADANGAG00011408
Aspergillus niger
CADANGAG00011408
I
COCCADRAFT_109263
Bipolaris zeicola
COCCADRAFT_109263
I
CADAFLAG00009131
Aspergillus flavus
CADAFLAG00009131
I
ACLA_016290
Aspergillus clavatus
CADACLAG00001582
I
BGHDH14_bgh04346
Blumeria graminis
BGHDH14_bgh04346
I
BDDG_03909
Blastomyces dermatitidis
BDDG_03909
I
Bcin08g04710
Botrytis cinerea
Bcin08g04710
I
BBA_03744
Beauveria bassiana
BBA_03744
I
ARB_03330
Arthroderma benhamiae
ARB_03330
I
AOL_s00215g441
Arthrobotrys oligospora
AOL_s00215g441
I
ACRE_052720
Acremonium chrysogenum
ACRE_052720
I
VDBG_07828
Verticillium albo atrum
VDBG_07828
I
MCYG_03949
Microsporum canis
MCYG_03949
I
FOXG_11527
Fusarium oxysporum
FOXG_11527
I
MAJ_02389
Metarhizium majus
MAJ_02389
I
MAC_01643
Metarhizium acridum
MAC_01643
I
LEMA_P107540.1
Leptosphaeria maculans
LEMA_P107540.1
I
HMPREF1624_04820
Sporothrix schenckii
HMPREF1624_04820
I
HCBG_01563
Histoplasma capsulatum
HCBG_01563
I
H101_07533
Trichophyton interdigitale
H101_07533
I
H072_3292
Dactylellina haptotyla
H072_3292
I
GLRG_00439
Colletotrichum graminicola
GLRG_00439
I
GGTG_01006
Gaeumannomyces graminis
GGTG_01006
I
FVEG_10296
Fusarium verticillioides
FVEG_10296
I
FPSE_00129
Fusarium pseudograminearum
FPSE_00129
I
CIMG_09377
Coccidioides immitis
CIMG_09377
I
FFUJ_09555
Fusarium fujikuroi
FFUJ_09555
I
F503_04589
Ophiostoma piceae uamh
F503_04589
I
EV44_g2662
Erysiphe necator
EV44_g2662
I
EPUS_05568
Endocarpon pusillum
EPUS_05568
I
CTHT_0026520
Chaetomium thermophilum
CTHT_0026520
I
CSUB01_08637
Colletotrichum sublineola
CSUB01_08637
I
CPUR_00998
Claviceps purpurea
CPUR_00998
I
CPC735_017550
Coccidioides posadasii
CPC735_017550
I
COCVIDRAFT_100340
Bipolaris victoriae
COCVIDRAFT_100340
I
COCSADRAFT_141952
Bipolaris sorokiniana
COCSADRAFT_141952
I
COCMIDRAFT_27930
Bipolaris oryzae
COCMIDRAFT_27930
I