CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GJ19805
(
Drosophila virilis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
FBgn0206947
T038922_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
amos
M03603_2.00
Drosophila melanogaster
RVCATATGBY
RVCATATGBY
SELEX
Nitta et al.(2015)
amos_1
0.890
0.981
amos
M03604_2.00
Drosophila melanogaster
RRCAKMTGYY
RRCAKMTGYY
SELEX
Nitta et al.(2015)
amos_2
0.890
0.981
amos
M05952_2.00
Drosophila melanogaster
RMCAYMTGBYV
BRVCAKRTGKY
B1H
Zhu et al.(2011)
amos_da_SANGER_10_FBgn0003270
0.890
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0234222
bHLH
142
194
RRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLL
Links
Other
bHLH
family TFs
Other
Drosophila virilis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G10416
Brachypodium distachyon
BRADI3G10416
N
MLOC_58126
Hordeum vulgare
MLOC_58126
N
Traes_1AL_DD7FB8E96
Triticum aestivum
Traes_1AL_DD7FB8E96
N
Traes_1BL_B4400C4B7
Triticum aestivum
Traes_1BL_B4400C4B7
N
Traes_1DL_F9E8D5568
Triticum aestivum
Traes_1DL_F9E8D5568
N