bHLH34 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.3__2536__AT3G23210.1 T039124_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH34
M01704_2.00 		Arabidopsis thaliana
VCACGYGH
DCRCGTGB		 PBM
Weirauch et al.(2014)
pTH7212 		0.914 0.980
BHLH34
M06734_2.00 		Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN
NGDCACGTGBNNNNHNNDNNN		 Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a 		0.914 0.980
BHLH34
M06735_2.00 		Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN
NNNNNNNNVCACGTGNNNNNYWY		 Dap-seq
OMalley et al.(2016)
bHLH34_col 		0.914 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__2536__AT3G23210.1 bHLH 162 212

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_138230 Schistosoma mansoni Smp_138230 N
SMU15015104 Schmidtea mediterranea SMU15015104 N
A_03808 Schistosoma haematobium A_03808 N
csin102518 Clonorchis sinensis csin102518 N
D915_09108 Fasciola hepatica D915_09108 N
ECANG7_05291 Echinococcus canadensis ECANG7_05291 N
EmuJ_000712700 Echinococcus multilocularis EmuJ_000712700 N
HDID_0000996601 Hymenolepis diminuta HDID_0000996601 N
HmN_000525500 Hymenolepis microstoma HmN_000525500 N
HNAJ_0001235101 Hymenolepis nana HNAJ_0001235101 N
MCOS_0000898001 Mesocestoides corti MCOS_0000898001 N
SCUD_0000031701 Schistosoma curassoni SCUD_0000031701 N
T265_06319 Opisthorchis viverrini T265_06319 N
TsM_001167900 Taenia solium TsM_001167900 N