CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ISCW007040
(
Ixodes scapularis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ISCW007040
T040524_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Clk
M05972_2.00
Drosophila melanogaster
MCACGTGV
BCACGTGK
B1H
Zhu et al.(2011)
Clk_cyc_SANGER_5_FBgn0023076
0.856
0.725
Clk
M05973_2.00
Drosophila melanogaster
CACGTGSY
RSCACGTG
B1H
Zhu et al.(2011)
gce_Clk_SANGER_5_FBgn0023076
0.856
0.725
Clk
M05974_2.00
Drosophila melanogaster
CACGTGKM
KACACGTG
B1H
Zhu et al.(2011)
Met_Clk_SANGER_5_FBgn0023076
0.856
0.725
Clk
M05975_2.00
Drosophila melanogaster
SACACGTGY
RCACGTGTS
B1H
Zhu et al.(2011)
tai_Clk_SANGER_5_FBgn0023076
0.856
0.725
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ISCW007040-PA
bHLH
36
86
RSKSRNLSEKKRRDQFNMLINELCSMVSTSARKMDKSTVLRSTIAFLRSHN
Links
Other
bHLH
family TFs
Other
Ixodes scapularis
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_04527
Arthroderma otae
MCYG_04527
N
PMAA_029710
Penicillium marneffei
PMAA_029710
N
UREG_01015
Uncinocarpus reesii
UREG_01015
N
TSTA_068680
Talaromyces stipitatus
TSTA_068680
N
TEQG_02005
Trichophyton equinum
TEQG_02005
N
PVAR5_2222
Byssochlamys spectabilis
PVAR5_2222
N
PMAA_029710
Talaromyces marneffei
PMAA_029710
N
PABG_01676
Paracoccidioides brasiliensis
PABG_01676
N
PAAG_11207
Paracoccidioides sp lutzii
PAAG_11207
N
MGYG_02110
Microsporum gypseum
MGYG_02110
N
CIMG_01069
Coccidioides immitis
CIMG_01069
N
HCBG_00932
Histoplasma capsulatum
HCBG_00932
N
H105_05671
Trichophyton soudanense
H105_05671
N
H102_05631
Trichophyton rubrum
H102_05631
N
H101_00145
Trichophyton interdigitale
H101_00145
N
CPC735_052920
Coccidioides posadasii
CPC735_052920
N
BDDG_00723
Blastomyces dermatitidis
BDDG_00723
N
ARB_04972
Arthroderma benhamiae
ARB_04972
N
MCYG_04527
Microsporum canis
MCYG_04527
N