MTR_1g043430 (Medicago truncatula)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 MTR_1g043430 T041574_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH104
M01706_2.00 		Arabidopsis thaliana
GGCACGTGCC
GGCACGTGCC		 PBM
Weirauch et al.(2014)
pTH7365 		0.878 0.788
BHLH104
M06737_2.00 		Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH
DVNHSNDVHHKVCACGTGBC		 Dap-seq
OMalley et al.(2016)
bHLH104_col_b 		0.878 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES60307 bHLH 91 142

Links

Other bHLH family TFs
Other Medicago truncatula TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH14 Arabidopsis thaliana AT4G00870 D 0.000
PK09702.1 Cannabis sativa PK09702.1 D 0.000
Al_scaffold_0006_3930 Arabidopsis lyrata Al_scaffold_0006_3930 I 0.000
AMTR_s00002p00225810 Amborella trichopoda AMTR_s00002p00225810 I 0.000
AMTR_s00025p00048410 Amborella trichopoda AMTR_s00025p00048410 I 0.000
AMTR_s00121p00026620 Amborella trichopoda AMTR_s00121p00026620 I 0.000
BGIOSGA026551 Oryza indica BGIOSGA026551 I 0.000
BGIOSGA029426 Oryza indica BGIOSGA029426 I 0.000
BGIOSGA033493 Oryza indica BGIOSGA033493 I 0.000
BRADI1G54070 Brachypodium distachyon BRADI1G54070 I 0.000
BRADI3G34200 Brachypodium distachyon BRADI3G34200 I 0.000
GLYMA02G16670 Glycine max GLYMA02G16670 I 0.000
GLYMA03G30940 Glycine max GLYMA03G30940 I 0.000
GLYMA07G05740 Glycine max GLYMA07G05740 I 0.000
GLYMA10G03140 Glycine max GLYMA10G03140 I 0.000
GLYMA16G02320 Glycine max GLYMA16G02320 I 0.000
GRMZM2G001930 Zea mays GRMZM2G001930 I 0.000
GRMZM2G013688 Zea mays GRMZM2G013688 I 0.000
GRMZM2G038479 Zea mays GRMZM2G038479 I 0.000
GRMZM2G049229 Zea mays GRMZM2G049229 I 0.000
GRMZM2G107560 Zea mays GRMZM2G107560 I 0.000
GSMUA_Achr10G07470_001 Musa acuminata GSMUA_Achr10G07470_001 I 0.000
GSMUA_Achr11G17840_001 Musa acuminata GSMUA_Achr11G17840_001 I 0.000
GSMUA_Achr1G18910_001 Musa acuminata GSMUA_Achr1G18910_001 I 0.000
GSMUA_Achr2G18140_001 Musa acuminata GSMUA_Achr2G18140_001 I 0.000
GSMUA_Achr3G17620_001 Musa acuminata GSMUA_Achr3G17620_001 I 0.000
GSMUA_Achr4G16980_001 Musa acuminata GSMUA_Achr4G16980_001 I 0.000
GSMUA_Achr6G21490_001 Musa acuminata GSMUA_Achr6G21490_001 I 0.000
GSMUA_Achr7G04720_001 Musa acuminata GSMUA_Achr7G04720_001 I 0.000
GSMUA_Achr8G14720_001 Musa acuminata GSMUA_Achr8G14720_001 I 0.000
GSMUA_AchrUn_randomG02900_001 Musa acuminata GSMUA_AchrUn_randomG02900_001 I 0.000
LPERR03G22350 Leersia perrieri LPERR03G22350 I 0.000
LPERR08G19100 Leersia perrieri LPERR08G19100 I 0.000
LPERR09G12780 Leersia perrieri LPERR09G12780 I 0.000
LPERR10G15300 Leersia perrieri LPERR10G15300 I 0.000
MLOC_71611 Hordeum vulgare MLOC_71611 I 0.000
MTR_1g072320 Medicago truncatula MTR_1g072320 I 0.000
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I 0.000
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I 0.000
OGLUM10G19510 Oryza glumaepatula OGLUM10G19510 I 0.000
OLONG_011820 Oryza longistaminata OLONG_011820 I 0.000
OMERI08G17270 Oryza meridionalis OMERI08G17270 I 0.000
ONIVA08G25370 Oryza nivara ONIVA08G25370 I 0.000
ONIVA09G17720 Oryza nivara ONIVA09G17720 I 0.000
ONIVA10G22030 Oryza nivara ONIVA10G22030 I 0.000
OPUNC10G17860 Oryza punctata OPUNC10G17860 I 0.000
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I 0.000
ORGLA10G0146100 Oryza glaberrima ORGLA10G0146100 I 0.000
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I 0.000
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I 0.000
ORUFI10G20700 Oryza rufipogon ORUFI10G20700 I 0.000
OS08G0543700 Oryza sativa OS08G0543700 I 0.000
OS09G0519100 Oryza sativa OS09G0519100 I 0.000
MYC2 Oryza sativa OS10G0575000 I 0.000
PGSC0003DMG400012891 Solanum tuberosum PGSC0003DMG400012891 I 0.000
PGSC0003DMG400018332 Solanum tuberosum PGSC0003DMG400018332 I 0.000
POPTR_0001s02450 Populus trichocarpa POPTR_0001s02450 I 0.000
POPTR_0002s17750 Populus trichocarpa POPTR_0002s17750 I 0.000
POPTR_0005s23020 Populus trichocarpa POPTR_0005s23020 I 0.000
PRUPE_ppa002884m2g Prunus persica PRUPE_ppa002884m2g I 0.000
PRUPE_ppa004680mg Prunus persica PRUPE_ppa004680mg I 0.000
Sb01g028230 Sorghum bicolor Sb01g028230 I 0.000
Sb02g006390 Sorghum bicolor Sb02g006390 I 0.000
Sb02g030110 Sorghum bicolor Sb02g030110 I 0.000
Sb02g030120 Sorghum bicolor Sb02g030120 I 0.000
Sb07g025310 Sorghum bicolor Sb07g025310 I 0.000
Si015513m.g Setaria italica Si015513m.g I 0.000
Si029106m.g Setaria italica Si029106m.g I 0.000
Si031900m.g Setaria italica Si031900m.g I 0.000
Si032741m.g Setaria italica Si032741m.g I 0.000
Si039973m.g Setaria italica Si039973m.g I 0.000
Solyc01g096370.2 Solanum lycopersicum Solyc01g096370.2 I 0.000
Solyc09g065100.1 Solanum lycopersicum Solyc09g065100.1 I 0.000
TCM_004403 Theobroma cacao TCM_004403 I 0.000
TCM_005064 Theobroma cacao TCM_005064 I 0.000
TCM_015714 Theobroma cacao TCM_015714 I 0.000
VIT_02s0012g01320 Vitis vinifera VIT_02s0012g01320 I 0.000
VIT_02s0025g02610 Vitis vinifera VIT_02s0025g02610 I 0.000
TT8 Vitis vinifera VIT_07s0104g00090 I 0.000
VIT_15s0048g02820 Vitis vinifera VIT_15s0048g02820 I 0.000
Ca_07836 Cicer arietinum Ca_07836 I 0.000
Ca_17603 Cicer arietinum Ca_17603 I 0.000
Cla006801 Citrullus lanatus Cla006801 I 0.000
Cla006802 Citrullus lanatus Cla006802 I 0.000
Cla007989 Citrullus lanatus Cla007989 I 0.000
Cla016454 Citrullus lanatus Cla016454 I 0.000
Pm020164 Prunus mume Pm020164 I 0.000
27964.m000352 Ricinus communis 27964.m000352 I 0.000
27964.m000356 Ricinus communis 27964.m000356 I 0.000
29647.m002101 Ricinus communis 29647.m002101 I 0.000
29827.m002528 Ricinus communis 29827.m002528 I 0.000
cassava24625.valid.m1 Manihot esculenta cassava24625.valid.m1 I 0.000
cassava29522.valid.m1 Manihot esculenta cassava29522.valid.m1 I 0.000
cassava29800.valid.m1 Manihot esculenta cassava29800.valid.m1 I 0.000
cassava32651.m1 Manihot esculenta cassava32651.m1 I 0.000
cassava45205.m1 Manihot esculenta cassava45205.m1 I 0.000
cassava8764.m1 Manihot esculenta cassava8764.m1 I 0.000
Cucsa.120830 Cucumis sativus Cucsa.120830 I 0.000
Cucsa.178140 Cucumis sativus Cucsa.178140 I 0.000
Cucsa.313090 Cucumis sativus Cucsa.313090 I 0.000
mgf001993m Mimulus guttatus mgf001993m I 0.000
Aquca_026_00421 Aquilegia coerulea Aquca_026_00421 I 0.000
Aquca_037_00261 Aquilegia coerulea Aquca_037_00261 I 0.000
Aquca_054_00130 Aquilegia coerulea Aquca_054_00130 I 0.000
Bostr.7365s0026 Boechera stricta Bostr.7365s0026 I 0.000
Cagra.4923s0009 Capsella grandiflora Cagra.4923s0009 I 0.000
Carubv10001082m.g Capsella rubella Carubv10001082m.g I 0.000
Ciclev10011214m.g Citrus clementina Ciclev10011214m.g I 0.000
Ciclev10019118m.g Citrus clementina Ciclev10019118m.g I 0.000
Ciclev10019749m.g Citrus clementina Ciclev10019749m.g I 0.000
Eucgr.E00019 Eucalyptus grandis Eucgr.E00019 I 0.000
Eucgr.E01042 Eucalyptus grandis Eucgr.E01042 I 0.000
Eucgr.E01043 Eucalyptus grandis Eucgr.E01043 I 0.000
Eucgr.E01049 Eucalyptus grandis Eucgr.E01049 I 0.000
Eucgr.H01487 Eucalyptus grandis Eucgr.H01487 I 0.000
evm.TU.supercontig_141.19 Carica papaya evm.TU.supercontig_141.19 I 0.000
evm.TU.supercontig_71.72 Carica papaya evm.TU.supercontig_71.72 I 0.000
gene18651-v1.0-hybrid Fragaria vesca gene18651-v1.0-hybrid I 0.000
gene27827-v1.0-hybrid Fragaria vesca gene27827-v1.0-hybrid I 0.000
Gorai.001G151700 Gossypium raimondii Gorai.001G151700 I 0.000
Gorai.004G129600 Gossypium raimondii Gorai.004G129600 I 0.000
Gorai.004G149500 Gossypium raimondii Gorai.004G149500 I 0.000
Gorai.004G215900 Gossypium raimondii Gorai.004G215900 I 0.000
Gorai.007G111800 Gossypium raimondii Gorai.007G111800 I 0.000
Gorai.007G136400 Gossypium raimondii Gorai.007G136400 I 0.000
Gorai.008G128800 Gossypium raimondii Gorai.008G128800 I 0.000
Lus10005999.g Linum usitatissimum Lus10005999.g I 0.000
Lus10030970.g Linum usitatissimum Lus10030970.g I 0.000
MDP0000160600 Malus domestica MDP0000160600 I 0.000
MDP0000224302 Malus domestica MDP0000224302 I 0.000
MDP0000225680 Malus domestica MDP0000225680 I 0.000
MDP0000242554 Malus domestica MDP0000242554 I 0.000
MDP0000603546 Malus domestica MDP0000603546 I 0.000
MDP0000617077 Malus domestica MDP0000617077 I 0.000
MDP0000729514 Malus domestica MDP0000729514 I 0.000
MDP0000859492 Malus domestica MDP0000859492 I 0.000
MDP0000900024 Malus domestica MDP0000900024 I 0.000
orange1.1g005651m.g Citrus sinensis orange1.1g005651m.g I 0.000
orange1.1g037798m.g Citrus sinensis orange1.1g037798m.g I 0.000
orange1.1g046178m.g Citrus sinensis orange1.1g046178m.g I 0.000
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I 0.000
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I 0.000
Pavir.Ia03512 Panicum virgatum Pavir.Ia03512 I 0.000
Pavir.J01049 Panicum virgatum Pavir.J01049 I 0.000
Pavir.J28686 Panicum virgatum Pavir.J28686 I 0.000
Pavir.J38781 Panicum virgatum Pavir.J38781 I 0.000
Pavir.J40111 Panicum virgatum Pavir.J40111 I 0.000
SapurV1A.0003s0670 Salix purpurea SapurV1A.0003s0670 I 0.000
SapurV1A.0076s0350 Salix purpurea SapurV1A.0076s0350 I 0.000
SapurV1A.0741s0050 Salix purpurea SapurV1A.0741s0050 I 0.000
Thhalv10028584m.g Eutrema salsugineum Thhalv10028584m.g I 0.000
PK23618.1 Cannabis sativa PK23618.1 I 0.000
BRADI3G41930 Brachypodium distachyon BRADI3G41930 N 0.000
BRADI3G41940 Brachypodium distachyon BRADI3G41940 N 0.000
BRADI3G41950 Brachypodium distachyon BRADI3G41950 N 0.000
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N 0.000
F775_01879 Aegilops tauschii F775_01879 N 0.000
F775_42459 Aegilops tauschii F775_42459 N 0.000
GRMZM2G472671 Zea mays GRMZM2G472671 N 0.000
MLOC_40535 Hordeum vulgare MLOC_40535 N 0.000
Sb07g025330 Sorghum bicolor Sb07g025330 N 0.000
Sb07g025340 Sorghum bicolor Sb07g025340 N 0.000
Sb2273s002010 Sorghum bicolor Sb2273s002010 N 0.000
Si014241m.g Setaria italica Si014241m.g N 0.000
Si015024m.g Setaria italica Si015024m.g N 0.000
Si015026m.g Setaria italica Si015026m.g N 0.000
Si015213m.g Setaria italica Si015213m.g N 0.000
Si015343m.g Setaria italica Si015343m.g N 0.000
Traes_2BL_F38E032331 Triticum aestivum Traes_2BL_F38E032331 N 0.000
Traes_2BL_F38E03233 Triticum aestivum Traes_2BL_F38E03233 N 0.000
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N 0.000
Traes_5BL_D45BBFEBC Triticum aestivum Traes_5BL_D45BBFEBC N 0.000
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N 0.000
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N 0.000
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N 0.000
TRIUR3_29141 Triticum urartu TRIUR3_29141 N 0.000
Pavir.Fa00118 Panicum virgatum Pavir.Fa00118 N 0.000
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N 0.000
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N 0.000
Pavir.J19529 Panicum virgatum Pavir.J19529 N 0.000
Pavir.J27331 Panicum virgatum Pavir.J27331 N 0.000