OLONG_014962 (Oryza longistaminata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OLONG_014962 T042413_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT
M01709_2.00 		Arabidopsis thaliana
NCACGTGSN
NSCACGTGN		 PBM
Weirauch et al.(2014)
pTH8111 		0.444 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_014962-R1 bHLH 1 31

Links

Other bHLH family TFs
Other Oryza longistaminata TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra010591 Brassica rapa Bra010591 I 0.444
Pavir.J38250 Panicum virgatum Pavir.J38250 I 0.444
Pavir.J15575 Panicum virgatum Pavir.J15575 I 0.444
Eucgr.I00906 Eucalyptus grandis Eucgr.I00906 I 0.444
Traes_7DS_0536E73E5 Triticum aestivum Traes_7DS_0536E73E5 I 0.914
Traes_7BS_F67ED5C9E Triticum aestivum Traes_7BS_F67ED5C9E I 0.914
Sb10g004500 Sorghum bicolor Sb10g004500 I 0.444
ORUFI06G04330 Oryza rufipogon ORUFI06G04330 I 0.444
ORGLA06G0039900 Oryza glaberrima ORGLA06G0039900 I 0.444
ONIVA06G05510 Oryza nivara ONIVA06G05510 I 0.444
OMERI06G05430 Oryza meridionalis OMERI06G05430 I 0.444
OGLUM06G04430 Oryza glumaepatula OGLUM06G04430 I 0.444
OBART06G04330 Oryza barthii OBART06G04330 I 0.444
MLOC_77331 Hordeum vulgare MLOC_77331 I 0.869
BGIOSGA022375 Oryza indica BGIOSGA022375 I 0.444
GLYMA01G32890 Glycine max GLYMA01G32890 I 0.912
GLYMA03G32747 Glycine max GLYMA03G32747 I 0.871
MLOC_10815 Hordeum vulgare MLOC_10815 I 0.914
LPERR06G03910 Leersia perrieri LPERR06G03910 I 0.444
GRMZM2G030744 Zea mays GRMZM2G030744 I 0.893
OB06G13990 Oryza brachyantha OB06G13990 I 0.914
GRMZM2G017349 Zea mays GRMZM2G017349 I 0.444
Sb01g029220 Sorghum bicolor Sb01g029220 N 0.912
Thhalv10017520m.g Eutrema salsugineum Thhalv10017520m.g N 0.890
GLYMA02G00981 Glycine max GLYMA02G00981 N 0.869
GLYMA06G22790 Glycine max GLYMA06G22790 N 0.859
Traes_6DL_C8198CD4A Triticum aestivum Traes_6DL_C8198CD4A N 0.882
Traes_6AL_842E10085 Triticum aestivum Traes_6AL_842E10085 N 0.891
Traes_5DL_C6C077BB9 Triticum aestivum Traes_5DL_C6C077BB9 N 0.912
Traes_5AL_85F3BE385 Triticum aestivum Traes_5AL_85F3BE385 N 0.871
PGSC0003DMG400024523 Solanum tuberosum PGSC0003DMG400024523 N 0.890
OMERI10G14830 Oryza meridionalis OMERI10G14830 N 0.912
MLOC_49032 Hordeum vulgare MLOC_49032 N 0.882
OLONG_024366 Oryza longistaminata OLONG_024366 N 0.884
OLONG_008764 Oryza longistaminata OLONG_008764 N 0.901
OB03G34880 Oryza brachyantha OB03G34880 N 0.884