POPTR_0002s17310 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0002s17310 T043774_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.914 0.938
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.890 0.958
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.890 0.958
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.890 0.938
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.890 0.938
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.890 0.917
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.882 0.625
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.938
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.843 0.500
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.625
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s17310.1 bHLH 380 427

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HCBG_05620 Histoplasma capsulatum HCBG_05620 D
CIMG_05854 Coccidioides immitis CIMG_05854 I
MCYG_00576 Microsporum canis MCYG_00576 I
SNOG_07682 Stagonospora nodorum SNOG_07682 I
VDBG_01960 Verticillium albo atrum VDBG_01960 I
A1O1_08709 Capronia coronata A1O1_08709 I
A1O3_08094 Capronia epimyces A1O3_08094 I
A1O5_04435 Cladophialophora psammophila A1O5_04435 I
A1O7_03387 Cladophialophora yegresii A1O7_03387 I
A1O9_03458 Exophiala aquamarina A1O9_03458 I
A1O9_12959 Exophiala aquamarina A1O9_12959 I
AOL_s00004g648 Arthrobotrys oligospora AOL_s00004g648 I
ARB_01992 Arthroderma benhamiae ARB_01992 I
AUEXF2481DRAFT_8523 Aureobasidium subglaciale AUEXF2481DRAFT_8523 I
BBA_07683 Beauveria bassiana BBA_07683 I
BDDG_07136 Blastomyces dermatitidis BDDG_07136 I
BGHDH14_bgh05211 Blumeria graminis BGHDH14_bgh05211 I
ACLA_098160 Aspergillus clavatus CADACLAG00009206 I
CADAFLAG00008794 Aspergillus flavus CADAFLAG00008794 I
AFUA_6G02330 Aspergillus fumigatus CADAFUAG00000640 I
CADANGAG00010285 Aspergillus niger CADANGAG00010285 I
ATEG_07219 Aspergillus terreus CADATEAG00001089 I
NFIA_048590 Neosartorya fischeri CADNFIAG00005471 I
CCM_06477 Cordyceps militaris CCM_06477 I
CFIO01_13219 Colletotrichum fioriniae CFIO01_13219 I
CGGC5_3218 Colletotrichum gloeosporioides CGGC5_3218 I
CH063_09116 Colletotrichum higginsianum CH063_09116 I
Cob_13124 Colletotrichum orbiculare Cob_13124 I
COCC4DRAFT_55544 Bipolaris maydis COCC4DRAFT_55544 I
COCCADRAFT_21675 Bipolaris zeicola COCCADRAFT_21675 I
COCMIDRAFT_81911 Bipolaris oryzae COCMIDRAFT_81911 I
COCSADRAFT_21477 Bipolaris sorokiniana COCSADRAFT_21477 I
COCVIDRAFT_21164 Bipolaris victoriae COCVIDRAFT_21164 I
CPC735_024740 Coccidioides posadasii CPC735_024740 I
CSUB01_08239 Colletotrichum sublineola CSUB01_08239 I
DOTSEDRAFT_68063 Dothistroma septosporum DOTSEDRAFT_68063 I
DRE_07643 Drechslerella stenobrocha DRE_07643 I
EPUS_04902 Endocarpon pusillum EPUS_04902 I
EURHEDRAFT_452525 Aspergillus ruber EURHEDRAFT_452525 I
EV44_g6223 Erysiphe necator EV44_g6223 I
FFUJ_05647 Fusarium fujikuroi FFUJ_05647 I
FGRRES_08924 Fusarium graminearum FGRRES_08924 I
FOXG_03656 Fusarium oxysporum FOXG_03656 I
FOXG_12523 Fusarium oxysporum FOXG_12523 I
FOXG_14016 Fusarium oxysporum FOXG_14016 I
FPSE_08907 Fusarium pseudograminearum FPSE_08907 I
FVEG_02531 Fusarium verticillioides FVEG_02531 I
G647_04998 Cladophialophora carrionii G647_04998 I
GGTG_04916 Gaeumannomyces graminis GGTG_04916 I
GLRG_04619 Colletotrichum graminicola GLRG_04619 I
GMDG_06896 Pseudogymnoascus destructans GMDG_06896 I
GSTUM_00012177001 Tuber melanosporum GSTUM_00012177001 I
H072_5617 Dactylellina haptotyla H072_5617 I
H101_06341 Trichophyton interdigitale H101_06341 I
H102_07503 Trichophyton rubrum H102_07503 I
H105_07531 Trichophyton soudanense H105_07531 I
HMPREF1120_04468 Exophiala dermatitidis HMPREF1120_04468 I
HMPREF1541_04403 Cyphellophora europaea HMPREF1541_04403 I
LEMA_P039610.1 Leptosphaeria maculans LEMA_P039610.1 I
M437DRAFT_72508 Aureobasidium melanogenum M437DRAFT_72508 I
M438DRAFT_354465 Aureobasidium pullulans M438DRAFT_354465 I
MAJ_08136 Metarhizium majus MAJ_08136 I
MANI_021400 Metarhizium anisopliae MANI_021400 I
MAPG_10394 Magnaporthe poae MAPG_10394 I
MBM_09565 Marssonina brunnea MBM_09565 I
MBR_06549 Metarhizium brunneum MBR_06549 I
MGU_10186 Metarhizium guizhouense MGU_10186 I
MGYG_01386 Microsporum gypseum MGYG_01386 I
MPH_04742 Macrophomina phaseolina MPH_04742 I
MYCFIDRAFT_89500 Pseudocercospora fijiensis MYCFIDRAFT_89500 I
Mycgr3G109237 Zymoseptoria tritici Mycgr3G109237 I
NechaG36533 Fusarium solani NechaG36533 I
OIDMADRAFT_116523 Oidiodendron maius OIDMADRAFT_116523 I
PABG_06482 Paracoccidioides brasiliensis PABG_06482 I
PCH_Pc22g23650 Penicillium rubens PCH_Pc22g23650 I
PDE_03379 Penicillium oxalicum PDE_03379 I
PDIP_61980 Penicillium digitatum PDIP_61980 I
PEX1_027650 Penicillium expansum PEX1_027650 I
PFICI_02807 Pestalotiopsis fici PFICI_02807 I
PITC_053720 Penicillium italicum PITC_053720 I
PMAA_018530 Talaromyces marneffei PMAA_018530 I
PTRG_05347 Pyrenophora triticirepentis PTRG_05347 I
PTT_12674 Pyrenophora teres PTT_12674 I
PV05_05708 Exophiala xenobiotica PV05_05708 I
PV06_02748 Exophiala oligosperma PV06_02748 I
PV07_06716 Cladophialophora immunda PV07_06716 I
PV08_11124 Exophiala spinifera PV08_11124 I
PV09_00253 Verruconis gallopava PV09_00253 I
PV10_05482 Exophiala mesophila PV10_05482 I
PV11_00872 Exophiala sideris PV11_00872 I
PVAR5_6560 Byssochlamys spectabilis PVAR5_6560 I
SAPIO_CDS5089 Scedosporium apiospermum SAPIO_CDS5089 I
SEPMUDRAFT_146422 Sphaerulina musiva SEPMUDRAFT_146422 I
SETTUDRAFT_102178 Setosphaeria turcica SETTUDRAFT_102178 I
SNOG_07682 Phaeosphaeria nodorum SNOG_07682 I
TEQG_05447 Trichophyton equinum TEQG_05447 I
TESG_05799 Trichophyton tonsurans TESG_05799 I
TRIATDRAFT_35002 Trichoderma atroviride TRIATDRAFT_35002 I
TRIREDRAFT_76872 Trichoderma reesei TRIREDRAFT_76872 I
TRIVIDRAFT_126611 Trichoderma virens TRIVIDRAFT_126611 I
TSTA_026540 Talaromyces stipitatus TSTA_026540 I
U727_00433250161 Penicillium solitum U727_00433250161 I
UCRNP2_2338 Neofusicoccum parvum UCRNP2_2338 I
UV8b_4663 Ustilaginoidea virens UV8b_4663 I
V499_05047 Pseudogymnoascus pannorum V499_05047 I
VDAG_10326 Verticillium dahliae VDAG_10326 I
VDBG_01960 Verticillium alfalfae VDBG_01960 I
VHEMI07137 Torrubiella hemipterigena VHEMI07137 I
W97_05539 Coniosporium apollinis W97_05539 I
X797_010723 Metarhizium robertsii X797_010723 I
YALI0_F15037g Yarrowia lipolytica YALI0_F15037g I
Z517_10389 Fonsecaea pedrosoi Z517_10389 I
Z518_01320 Rhinocladiella mackenziei Z518_01320 I
Z519_02267 Cladophialophora bantiana Z519_02267 I
e_gw1.2.1505.1 Nectria haematococca e_gw1.2.1505.1 I
estExt_fgenesh1_pg.C_20199 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20199 I
estExt_fgenesh1_pg.C_chr_40524 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_40524 I
synt_with_mycgr.1__94 Mycosphaerella fijiensis synt_with_mycgr.1__94 I
AB06986.1 Alternaria brassicicola AB06986.1 I
fgenesh1_pm.00855_#_114 Aspergillus carbonarius fgenesh1_pm.00855_#_114 I
Pc22g23650 Penicillium chrysogenum Pc22g23650 I
PMAA_018530 Penicillium marneffei PMAA_018530 I