CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si017804m.g
(
Setaria italica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Si017804m.g
T044750_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18401.1
M01126_2.00
Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN
PBM
Lambert et al.(2019)
pTH11272
0.863
0.804
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si017804m
bHLH
36
86
RKVQKADREKMRRDKLNEQFQELGNTLDPDRPRNDKATILGDTIQMLKDLT
Links
Other
bHLH
family TFs
Other
Setaria italica
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU08634
Neurospora crassa
NCU08634
D
SAPIO_CDS1284
Scedosporium apiospermum
SAPIO_CDS1284
I
fgenesh1_pg.C_scaffold_4000918
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_4000918
I
estExt_fgenesh3_pm.C_40010
Neurospora discreta
estExt_fgenesh3_pm.C_40010
I
X797_002511
Metarhizium robertsii
X797_002511
I
VHEMI05092
Torrubiella hemipterigena
VHEMI05092
I
VDBG_09975
Verticillium alfalfae
VDBG_09975
I
VDAG_06269
Verticillium dahliae
VDAG_06269
I
UV8b_5959
Ustilaginoidea virens
UV8b_5959
I
THITE_2120613
Thielavia terrestris
THITE_2120613
I
SMAC_09090
Sordaria macrospora
SMAC_09090
I
VDBG_09975
Verticillium albo atrum
VDBG_09975
I
PODANS_1_230
Podospora anserina
PODANS_1_230
I
PFICI_03083
Pestalotiopsis fici
PFICI_03083
I
NEUTE1DRAFT_127029
Neurospora tetrasperma
NEUTE1DRAFT_127029
I
MYCTH_2307931
Myceliophthora thermophila
MYCTH_2307931
I
MGU_09664
Metarhizium guizhouense
MGU_09664
I
MBR_00157
Metarhizium brunneum
MBR_00157
I
MANI_000381
Metarhizium anisopliae
MANI_000381
I
MAJ_05920
Metarhizium majus
MAJ_05920
I
MAC_05493
Metarhizium acridum
MAC_05493
I
CTHT_0074260
Chaetomium thermophilum
CTHT_0074260
I