VIT_11s0016g00380 (Vitis vinifera)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 VIT_11s0016g00380 T046197_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.209.40.1
M01756_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8070 		0.879 0.938
LRL2
M06738_2.00 		Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH69_col_a 		0.879 0.896
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.870 0.688
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.863 0.542
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.863 0.542
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.863 0.542
SPT
M01709_2.00 		Arabidopsis thaliana
NCACGTGSN
NSCACGTGN		 PBM
Weirauch et al.(2014)
pTH8111 		0.849 0.646
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.847 0.479
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.843 0.542
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.843 0.542
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.843 0.542
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.843 0.542
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_11s0016g00380.t01 bHLH 305 352

Links

Other bHLH family TFs
Other Vitis vinifera TFs

558 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000007371 Anas platyrhynchos ENSAPLG00000007371 N
ENSFALG00000012671 Ficedula albicollis ENSFALG00000012671 N
ENSGALG00000013754 Gallus gallus ENSGALG00000013754 N
ENSLACG00000006485 Latimeria chalumnae ENSLACG00000006485 N
ENSPFOG00000009456 Poecilia formosa ENSPFOG00000009456 N
PLAGL1 Taeniopygia guttata ENSTGUG00000011026 N
ENSXMAG00000017832 Xiphophorus maculatus ENSXMAG00000017832 N
Afo_R014860 Aptenodytes forsteri Afo_R014860 N
Brh_R011501 Buceros rhinoceros Brh_R011501 N
Cmyd_10012358 Chelonia mydas Cmyd_10012358 N
Gfo_R003811 Geospiza fortis Gfo_R003811 N
Ogr03776 Ophisaurus gracilis Ogr03776 N
Tal_R000329 Tyto alba Tal_R000329 N