Afo_R010643 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R010643 T046591_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.914 1.000
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.914 1.000
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.914 1.000
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.914 1.000
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.914 1.000
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.914 1.000
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.914 1.000
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.914 1.000
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.879 0.962
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.879 0.962
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.879 0.962
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.879 0.962
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R010643 bHLH 42 94

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMPREF1120_05596 Exophiala dermatitidis HMPREF1120_05596 I 0.000
PV07_01698 Cladophialophora immunda PV07_01698 N 0.000
NechaG86758 Fusarium solani NechaG86758 N 0.000
OIDMADRAFT_117559 Oidiodendron maius OIDMADRAFT_117559 N 0.000
PV04_02591 Capronia semiimmersa PV04_02591 N 0.000
PV04_08970 Capronia semiimmersa PV04_08970 N 0.000
PV05_08892 Exophiala xenobiotica PV05_08892 N 0.000
PV05_11665 Exophiala xenobiotica PV05_11665 N 0.000
PV06_01117 Exophiala oligosperma PV06_01117 N 0.000
PV06_01131 Exophiala oligosperma PV06_01131 N 0.000
HMPREF1120_07748 Exophiala dermatitidis HMPREF1120_07748 N 0.000
PV10_03377 Exophiala mesophila PV10_03377 N 0.000
PV11_04629 Exophiala sideris PV11_04629 N 0.000
Z517_01894 Fonsecaea pedrosoi Z517_01894 N 0.000
Z517_04340 Fonsecaea pedrosoi Z517_04340 N 0.000
Z517_05394 Fonsecaea pedrosoi Z517_05394 N 0.000
Z518_02371 Rhinocladiella mackenziei Z518_02371 N 0.000
Z519_11167 Cladophialophora bantiana Z519_11167 N 0.000
fgenesh1_pg.sca_32_chr11_3_0000061 Nectria haematococca fgenesh1_pg.sca_32_chr11_3_0000061 N 0.000
fgenesh1_pg.sca_32_chr11_3_0000153 Nectria haematococca fgenesh1_pg.sca_32_chr11_3_0000153 N 0.000
CPC735_036320 Coccidioides posadasii CPC735_036320 N 0.000
A1O1_05514 Capronia coronata A1O1_05514 N 0.000
A1O1_07238 Capronia coronata A1O1_07238 N 0.000
A1O3_04485 Capronia epimyces A1O3_04485 N 0.000
A1O3_06066 Capronia epimyces A1O3_06066 N 0.000
A1O5_05682 Cladophialophora psammophila A1O5_05682 N 0.000
A1O7_02428 Cladophialophora yegresii A1O7_02428 N 0.000
A1O9_07253 Exophiala aquamarina A1O9_07253 N 0.000
CADAFLAG00008683 Aspergillus flavus CADAFLAG00008683 N 0.000
ATEG_06092 Aspergillus terreus CADATEAG00000839 N 0.000
NechaG86666 Fusarium solani NechaG86666 N 0.000
FFUJ_11668 Fusarium fujikuroi FFUJ_11668 N 0.000
FGRRES_03102 Fusarium graminearum FGRRES_03102 N 0.000
FOXG_12298 Fusarium oxysporum FOXG_12298 N 0.000
FPSE_02123 Fusarium pseudograminearum FPSE_02123 N 0.000
FVEG_10827 Fusarium verticillioides FVEG_10827 N 0.000
G647_08938 Cladophialophora carrionii G647_08938 N 0.000
HMPREF1120_05306 Exophiala dermatitidis HMPREF1120_05306 N 0.000
CIMG_02802 Coccidioides immitis CIMG_02802 N 0.000