Gfo_R001095 (Geospiza fortis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gfo_R001095 T047300_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Myc
M08751_2.00 		Mus musculus
GVSCACGTGGNN
NNCCACGTGSBC		 Misc
Kulakovskiy et al.(2013)
MYC_MOUSE.H11MO.0.A 		0.890 0.844
Myc
M09467_2.00 		Mus musculus
SCACGTGSNN
NNSCACGTGS		 Misc
Heinz et al.(2010)
mES-cMyc_GSE11431 		0.890 0.844
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R001095 bHLH 159 211
Gfo_R001095 bHLH 218 242

Links

Other bHLH family TFs
Other Geospiza fortis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI03G28040 Oryza meridionalis OMERI03G28040 N
Pavir.Ib04304 Panicum virgatum Pavir.Ib04304 N
Traes_4BS_1281828D6 Triticum aestivum Traes_4BS_1281828D6 N
Si036257m.g Setaria italica Si036257m.g N
Sb01g010570 Sorghum bicolor Sb01g010570 N
OS03G0708800 Oryza sativa OS03G0708800 N
ORUFI03G32760 Oryza rufipogon ORUFI03G32760 N
ORGLA03G0291000 Oryza glaberrima ORGLA03G0291000 N
OPUNC03G28630 Oryza punctata OPUNC03G28630 N
BGIOSGA009949 Oryza indica BGIOSGA009949 N
OGLUM03G31690 Oryza glumaepatula OGLUM03G31690 N
OBART03G31460 Oryza barthii OBART03G31460 N
LPERR03G26090 Leersia perrieri LPERR03G26090 N
GSMUA_Achr3G02200_001 Musa acuminata GSMUA_Achr3G02200_001 N
GSMUA_Achr2G21580_001 Musa acuminata GSMUA_Achr2G21580_001 N
GRMZM2G162405 Zea mays GRMZM2G162405 N
GRMZM2G041818 Zea mays GRMZM2G041818 N
BRADI1G11200 Brachypodium distachyon BRADI1G11200 N