Ogr16001 (Ophisaurus gracilis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ogr16001 T047558_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Npas2
M01731_2.00 		Mus musculus
NVCACGTGBN
NVCACGTGBN		 PBM
Weirauch et al.(2014)
pTH5457 		0.894 0.980
NPAS2
M04158_2.00 		Homo sapiens
NRCACGTGKH
DMCACGTGYN		 SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX 		0.894 0.980
Npas2
M09468_2.00 		Mus musculus
VKCACRTGKM
KMCAYGTGMB		 Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860 		0.894 0.980
NPAS2
M04159_2.00 		Homo sapiens
DVCRCRTGKH
DMCAYGYGBH		 SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX 		0.894 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr16001 bHLH 105 153

Links

Other bHLH family TFs
Other Ophisaurus gracilis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRERF1 Callithrix jacchus ENSCJAG00000004347 N
ENSCSAG00000011422 Chlorocebus sabaeus ENSCSAG00000011422 N
BX000363.1 Danio rerio ENSDARG00000088631 N
TRERF1 Homo sapiens ENSG00000124496 N
TRERF1 Microcebus murinus ENSMICG00000011387 N
TRERF1 Oryctolagus cuniculus ENSOCUG00000016703 N
Afo_R004751 Aptenodytes forsteri Afo_R004751 N
Brh_R013432 Buceros rhinoceros Brh_R013432 N
Gfo_R010962 Geospiza fortis Gfo_R010962 N